Pairwise Alignments

Query, 1001 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1021 a.a., TonB-dependent receptor for laminaribiose (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  625 bits (1612), Expect = 0.0
 Identities = 362/1016 (35%), Positives = 562/1016 (55%), Gaps = 41/1016 (4%)

Query: 9    SVLAAFCLLTINV-ALAQNITVKGKVIDGGDKTPLPGVTILVKGTQNGTQTDVNGNYSIS 67
            S++A  CLL  +V A AQ  TV G V D  ++ PL G ++LV+GT  GT TD++G YSIS
Sbjct: 24   SIVALTCLLLTSVSAFAQTKTVTGTVTDAANE-PLIGASVLVQGTSTGTITDMDGKYSIS 82

Query: 68   VPGDATLVFNFVGYTALEQAVNNQTTLNVSLASSTQQLEQVVVVGYGTQRKIDVTGAVAS 127
            V  +  LVF++VG T     V  Q  +NV+L   +Q L + VV+GYG+ +K D+TG++ +
Sbjct: 83   VTPEDVLVFSYVGMTTQSVKVGAQNVINVTLKEDSQVLAETVVIGYGSAKKRDLTGSITN 142

Query: 128  VKGEDISKQASVNPVGALQGKVAGVSITNTGTPGGSPTITIRGTGTIYGKSVPLYVVDGV 187
            VKGE+I+ + + NP+ +LQGKVAGV I N+G  G  P I IRGT +I G   PLYVVDG+
Sbjct: 143  VKGEEIANKPATNPLSSLQGKVAGVQIVNSGRAGADPEIRIRGTNSINGYK-PLYVVDGL 201

Query: 188  WYDDINFLNPADIANISILKDASAQSIYGIRAANGVVLVTTNKGKKGDAVINYNGTVGFQ 247
            + D+INFLNP DI ++ ILKD S+ +I+G+R ANGV+++TT K K+G  ++N N + GF+
Sbjct: 202  FNDNINFLNPEDIESMEILKDPSSLAIFGVRGANGVIIITTKKAKEGQTLVNINTSFGFK 261

Query: 248  KVTNQVEMANASEYAAAVNEAYALQGAQPLFANTNLGEGTNWYDVVLREALVTNHQLSIS 307
            KV ++V++ N  ++    +E  A Q   P F  +     TNW D + + A +TN+ +SI+
Sbjct: 262  KVVDKVDLVNGPQFQELYSEQLANQKDTP-FDFSGWNANTNWQDEIFQTAFITNNNISIT 320

Query: 308  GGSEKSTYNLSLGYLNQDGIVKNNNYKRYTARLSNDFQIFQPLKIGYNVTATSSKSKDAP 367
            G S K ++ L +GY ++ G +K+  + + T   SND++I   LK+G+      +   D+ 
Sbjct: 321  GASPKHSFYLGVGYSHEQGNIKHEKFSKVTINASNDYKITDFLKVGFQFNGARTLPADSK 380

Query: 368  STIFRALYAASPVVPVFNAD-GSYGDPNAFNLGNGSNMNPQATLDFFNQQTTKYKVTGNV 426
              +      A+P+ PV+N + G Y     F     +N      L     +   Y+ +GN+
Sbjct: 381  QVL--GALRAAPIAPVYNKEYGLYSVLPEFQKAQINNPMVDVDLKANTTKAENYRASGNI 438

Query: 427  YAELKFLKDFTFKTSFGGDFGQEEVRGYIPVYK------ASNTQQNTNSRLDIDRIENRN 480
            Y E+ FLK F FK  F  D+     R Y+PV K      A +       + ++ + +   
Sbjct: 439  YGEVDFLKHFNFKAMFSMDYASNNGRTYLPVMKVYDDTAAGDVVTLGTGKTEVSQFKENE 498

Query: 481  WIIEN--TLTYDKKWT--DHSLTVLVGQTAQRNKMYTINA---DALNVPYTSEGD-LYLA 532
              +++   LTY   +   +H+LT  VG T   N +  ++      + +    + D  +++
Sbjct: 499  TKVQSDYLLTYTNSFDHGNHNLTATVGFTTYYNSLSRLDGARKQGVGLVIPDDPDKWFVS 558

Query: 533  LGNAASRNITDSGELSTFASYFARVNYSYKNRYLLNASIRRDGASQFFGSDNLWGNFPSI 592
            +G+AA+     +    T  S  ARV Y+YK +YL N S RRDG+S F  + N W NF S+
Sbjct: 559  IGDAATATNGSTQWERTTVSMLARVIYNYKGKYLFNGSFRRDGSSAFSYTGNEWQNFFSL 618

Query: 593  GAGWVISNEEFMKDQKIFSNLKLRGSWGKVGNAGVPFNPSTQTVDQSAGLVAIFG--GLP 650
            G GW+++ EEFMKD K    LK++ S+G +GN  +      + +  +A   A+FG   + 
Sbjct: 619  GGGWLMTEEEFMKDIKWLDMLKIKASYGTLGNQNLDRAYPAEPLLSNA-YSAVFGKPSII 677

Query: 651  YTGASIRSIVPPFLLWERSAGTDVGLEMGFLNNRLTVEADYYSRKTEQAIFDIPVFGNLG 710
            Y G  +  +  P L WE+    + G E   L NRL  E  YY ++T+  + ++P  G  G
Sbjct: 678  YPGYQLSYLPNPNLRWEKVEAWEAGFETNVLRNRLHFEGVYYKKRTKDLLAEVP--GISG 735

Query: 711  TANSTLIANQADIQNRGFEFSATWADKTEGGFSYSVSGNVGINNNKVLNVTSGSNPIYRG 770
            T     I N  +I+N G E +A+W D+  G + YSVS N+    NKV ++      I  G
Sbjct: 736  TVPG--IGNLGEIENMGVEMAASWRDQI-GDWGYSVSANLTTIKNKVKSLVQDGYSIIAG 792

Query: 771  GAGITSGYLSTRTVNNRPIGEFFGYQVEGVFQTDAEAAAWP-----GFKRGDFKYADING 825
                      + T+   PIG F+GY+V GV+Q+ A+  A P         GD K+AD+N 
Sbjct: 793  DK------QQSYTMAGYPIGFFYGYKVAGVYQSQADIDASPENTLATVTPGDLKFADVNR 846

Query: 826  DGIIDLRDRVVLGNPNPKFTYGVNTNFAYKNFDLTLDIQGVADVDVFNANLSNRFGNENY 885
            DG I   DR ++GNP P FTYG++    YKN+ L +D+ G    ++F    +  F   NY
Sbjct: 847  DGKITPEDRTMIGNPTPDFTYGLSLGVNYKNWSLGIDMMGQHGNEIFRTWDNYNFAQFNY 906

Query: 886  TKDFISNRWTSAGTSNTYASASLASGLNNAPNSFYVEKGDYIRLRNIQLGYTLPQVISNK 945
                + +RW   GTSN+    +    +NN  + +Y+E G + R+RN+QL Y+  + +  K
Sbjct: 907  LSQRM-DRWHGEGTSNSQPLLNSKHSINNLNSEYYIEDGSFFRIRNVQLAYSFDKALLAK 965

Query: 946  MKMQRLRLFVNAQNAVNIFGYKGFSPEVGGAPTNAGIDTNVYPLFATYNFGVNVTF 1001
            +++Q L+++VN QN        G++PE+GG+ T  G+D   YP+ A Y FG+N+TF
Sbjct: 966  IRLQALKVYVNIQNLKTWKHNTGYTPELGGSATTFGVDDGSYPVPAVYTFGINLTF 1021