Pairwise Alignments

Query, 1001 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 999 a.a., TonB-dependent receptor for dextran (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  533 bits (1373), Expect = e-155
 Identities = 345/1014 (34%), Positives = 538/1014 (53%), Gaps = 51/1014 (5%)

Query: 10   VLAAFCLLTINVALAQNITVKGKVIDGGDKTPLPGVTILVKGTQNGTQTDVNGNYSISVP 69
            +L  + LL    A AQ ITVKG V+D   + P+ G +++   + NGT TD++GN+S++V 
Sbjct: 15   LLIMWGLLLSLSAFAQQITVKGHVVDATGE-PVIGASVIEGKSTNGTITDIDGNFSLNVS 73

Query: 70   GDATLVFNFVGYTALEQAVNNQTTLNVSLASSTQQLEQVVVVGYGTQRKIDVTGAVASVK 129
             ++ L  +FVGY     +VN +T L V+L   T+ L++VVVVGYGT +K D+TGAV+SV 
Sbjct: 74   ANSALTISFVGYKTQTVSVNGKTALKVTLQEDTEVLDEVVVVGYGTMKKSDLTGAVSSVG 133

Query: 130  GEDISKQASVNPVGALQGKVAGVSITNTGTPGGSPTITIRGTGTIYGKSVPLYVVDGVWY 189
             +DI      N   A+QGKV+GV I + G PG + TI IRG GTI   S PL V+DG+  
Sbjct: 134  VKDIKDSPVANIGQAMQGKVSGVQIIDAGKPGDNVTIKIRGLGTI-NNSNPLVVIDGIPT 192

Query: 190  D-DINFLNPADIANISILKDASAQSIYGIRAANGVVLVTTNKGKKGDAVINYNGTVGFQK 248
            D  ++ LN AD+  + +LKDASA +IYG R ANGVV++T+ +G +G   +  N     Q 
Sbjct: 193  DLGLSSLNMADVERVDVLKDASATAIYGSRGANGVVMITSKRGAEGAGKVTVNANWAIQN 252

Query: 249  VTNQVEMANASEYAAAVNEAYAL--QGAQPLFAN-TNLGEGTNWYDVVLREALVTNHQLS 305
             T   +M NA++YAA  N+  +       P +A+ ++LG+GTNW D +LR  +  ++ +S
Sbjct: 253  ATKVPDMLNAAQYAALSNDMLSNNDDNTNPYWADPSSLGKGTNWLDEMLRTGVKQSYSVS 312

Query: 306  ISGGSEKSTYNLSLGYLNQDGIVKNNNYKRYTARLSNDFQIFQPLKIGYNVTATSSKSKD 365
             SGG+EK+ Y +S G+L+Q GIVK+ NY+R+  + ++D Q+ + LK   N+T ++   + 
Sbjct: 313  YSGGTEKAHYYVSGGFLDQSGIVKSVNYRRFNFQANSDAQVNKWLKFTTNLTFSTDVKEG 372

Query: 366  APSTIFRALYAASPVVPVFNADGSYGDPNAFNLGNGSNMNPQATLDFFNQQTTKYKVTGN 425
               +I  A+  A P  PV N DGS+  P       GS  NP  TL     +T  Y    N
Sbjct: 373  GTYSIGDAM-KALPTQPVKNDDGSWSGPGQEAQWYGSIRNPIGTLHMMTNETKGYNFLAN 431

Query: 426  VYAELKFLKDFTFKTSFGGDFGQEEVRGYIPVYKASNTQQNTNSRLDIDRIENRNWIIEN 485
            +  E+ F K    K++FG D        + P Y         +SR   D  ++  ++ +N
Sbjct: 432  ITGEITFTKWLKLKSTFGYDAKFWFADNFTPAYDWKPNPVEESSRYKSDN-KSFTYLWDN 490

Query: 486  TLTYDKKWT-DHSLTVLVGQTAQRNKMYTINADAL-----NVPYTSEGDLYLALGNAASR 539
               +D  +   H + V+ G +AQ N    +NA        N+     G+   +LG + S 
Sbjct: 491  YFVFDHTFAKKHRVGVMAGSSAQWNNYDYLNAQKNIFMFDNIHEMDNGEKMYSLGGSQSD 550

Query: 540  NITDSGELSTFASYFARVNYSYKNRYLLNASIRRDGASQFFGSDNLWGNFPSIGAGWVIS 599
                        S  AR+NYSY+++YLL A++RRDG+S+ FG +N WG FPS+   W +S
Sbjct: 551  --------WALLSLMARLNYSYEDKYLLTATVRRDGSSR-FGKNNRWGTFPSVSLAWRVS 601

Query: 600  NEE-FMKDQKIFSNLKLRGSWGKVGNAGVPFNPSTQTVDQSAGLVAIFGGLPYTGASIRS 658
             E+ F KD  + ++LKLR  +G  GN  +       + +     V  FG    T     +
Sbjct: 602  QEDWFPKDNFLMNDLKLRVGYGVTGNQEIGNYGFVASYNTG---VYPFGNNNSTALVSTT 658

Query: 659  IVPPFLLWERSAGTDVGLEMGFLNNRLTVEADYYSRKTEQAIF--DIPVFGNLGTANSTL 716
            +  P + WE     + G++M   ++R+++  D Y + T   +    IP+         T 
Sbjct: 659  LSNPNIHWEEVRQANFGVDMSLFDSRVSLSLDAYIKNTNDMLVKASIPITSGFEDTTET- 717

Query: 717  IANQADIQNRGFEFSATWADKTEGGFSYSVSGNVGINNNKVLNVTSGSNPIYRGGAGITS 776
              N   ++N+G E +    +  +G FS+  +     N N++L++ S   P++    G  +
Sbjct: 718  FTNAGKMRNKGVEMTLRTIN-LKGIFSWESALTATYNKNEILDLNS-ETPMFINQIG--N 773

Query: 777  GYLSTRTVNNRPIGEFFGYQVEGVFQTDAEA---AAWPGFKRGDFKYADINGDGIIDLRD 833
             Y+ T      PI  F+GY  +G+FQ   E    A  PG   GD ++ D+N DG+I+  D
Sbjct: 774  SYV-TMLKAGYPINVFYGYVTDGLFQNWGEVNRHATQPGAAPGDIRFRDLNNDGVINDED 832

Query: 834  RVVLGNPNPKFTYGVNTNFAYKNFDLTLDIQGVADVDVFNANLSNRFGNENYTKDF---- 889
            R +LGNPNP + + ++ N +YK ++L++ +QGVA   ++NA   N   NE     +    
Sbjct: 833  RTILGNPNPNWFFSLSNNLSYKGWELSVFLQGVAGNKIYNA---NNVDNEGMAAAYNQTT 889

Query: 890  -ISNRWTSAGTSNTYASASLASGLNNA-PNSFYVEKGDYIRLRNIQLGYTLPQVISNKMK 947
             + NRWT  GTS +   A       N   +  +VE G Y+RL+NI L YTLP+    K++
Sbjct: 890  AVLNRWTGEGTSYSMPRAIWGDPNQNCRVSDRFVENGSYLRLKNITLSYTLPKKWLQKIQ 949

Query: 948  MQRLRLFVNAQNAVNIFGYKGFSPEVGGAPTNAGIDTNVYPLFATYNFGVNVTF 1001
            ++  R+  + +N   I  Y GF PEV       GID++ YP+  T++ G+N  F
Sbjct: 950  LENARISFSCENVATITRYSGFDPEV----DVNGIDSSRYPISRTFSMGLNFNF 999