Pairwise Alignments

Query, 186 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Klebsiella michiganensis M5al

 Score = 92.0 bits (227), Expect = 6e-24
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 13/172 (7%)

Query: 15  VERTRNEAFNLLLKKYQQKIYWHIRRLVLNHDDCDDLLQEVFVKVWKNLDKFRSDSQLYT 74
           V++   +AFNLL+ +YQ K+   + R V    D  D++QE FVK W+ LD FR DS  YT
Sbjct: 14  VQKGDQKAFNLLVVRYQHKVASLVSRYV-PPGDIADVVQESFVKAWRALDSFRGDSAFYT 72

Query: 75  WIYRIATNESITFLNKQKQRNNTPLDEVSSELADNLVASSYFN----------GDKLELK 124
           W+YRIA N +  +L  Q +R   P  +V +  A+N  +                ++L   
Sbjct: 73  WLYRIAVNTAKNYLVAQGRR--PPSSDVDANDAENFESGGALKEISNPENLMLSEELRQI 130

Query: 125 LQKAILTLPEKQRIIFNMKYFDDMKYEEISEVLGTSVGALKASFHIAAKKIE 176
           + + I +LPE  R+   ++  D M YEEI+ ++   VG +++    A + I+
Sbjct: 131 VFRTIESLPEDLRMAITLRELDGMSYEEIAAIMDCPVGTVRSRIFRAREAID 182