Pairwise Alignments

Query, 342 a.a., pseudouridine synthase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase from Klebsiella michiganensis M5al

 Score =  177 bits (449), Expect = 3e-49
 Identities = 116/311 (37%), Positives = 168/311 (54%), Gaps = 15/311 (4%)

Query: 19  LKIIVDKGQSLLRIDKFLMVRVENASRNRIQNAIDAGNVLVNQ-KQIKASYKVKPYDEIS 77
           L   V + Q   R+D+ L     + SR+RI+  I    VLVN     K   KV   + I+
Sbjct: 7   LNATVSENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGCVSDKPKEKVLGGETIA 66

Query: 78  IVLPHPPRDTEVYPEDLPLDIIYEDSDLLVVNKAAGMVVHPGFNNYTGTLVNALAFHFEQ 137
           I +     +    P+D+PL+I+YED D+LV+NK   +VVHPG  N  GT++NAL  ++  
Sbjct: 67  IDV-EIEEEVRFQPQDIPLNIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHYYPA 125

Query: 138 LPQLPGNDGRPGLVHRIDKDTSGLLLISKNEKSITHLARQFFDHSITRKYIALVWGDIEN 197
           +  +P    R G+VHR+DKDT+GL++++K   + T L        ITR+Y A+  G +  
Sbjct: 126 IADVP----RAGIVHRLDKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMTA 181

Query: 198 DGTVTGYIGRSAKDRRVMDIYDDEEKGKWSVTHYKVLKRLGYVTLISCELETGRTHQIRA 257
            GTV   I R    R  M ++     GK +VTHY++++     T +   LETGRTHQIR 
Sbjct: 182 GGTVEEPISRHPTKRTHMAVHP---MGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRV 238

Query: 258 HMQHIGHPLFNDAMYGG-DKILKGTTFNKYKQFVDNCFELLPRQALHAQSLGFIHPSTKE 316
           HM HI HPL  D +YGG  +  KG +    ++F+        RQALHA  L   HP +  
Sbjct: 239 HMAHITHPLVGDQVYGGRPRPPKGAS----EEFI-TALRKFDRQALHATMLRLYHPISGI 293

Query: 317 YMYFESPLPPD 327
            M + +P+P D
Sbjct: 294 EMEWHAPIPQD 304