Pairwise Alignments

Query, 326 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 269 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 59.7 bits (143), Expect = 8e-14
 Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 125 ISKRYGLNRLNLRMKENKRKIIKERMGQL------GHIDCHHLDKAILRGQSRKLYLVCL 178
           + + Y   +L +R +  +++ +  R   L       H     +  A+  G  R+  ++ +
Sbjct: 73  LRRLYREEKLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDG--RQFRVLAV 130

Query: 179 LDDYSRLAWAEVTEDITSLTVMFATMRCINMLQSEYGIKFEEIISDNGPEFGQRQSQNKM 238
           +DDYSR   A V +  TSL+ +   +R ++ L    G +   ++SDNG E       +  
Sbjct: 131 VDDYSRECLALVAD--TSLSGL-RVVRELDALMLRRG-QPAMVVSDNGTELTSVAVLSWC 186

Query: 239 NHPFERMLIELDIKHRYTQPYRPQTNGKVERFWRTLKEDLIEETDFDSIEELHDELFQYM 298
                       I+  Y  P +P  NG VE F    +++L+ E+ F S+ +  +++  + 
Sbjct: 187 QRT--------GIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQ 238

Query: 299 LYYNQERPHQGIGGITPIE 317
             YN  RPH G+G I P+E
Sbjct: 239 HDYNHHRPHSGLGNIPPVE 257