Pairwise Alignments

Query, 1768 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 634 a.a., ATP-dependent DNA helicase recQ (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.5 bits (127), Expect = 8e-11
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 977  HTGQISNEKRKLREREFRSGEISALFCSPTMELGIDIADLSIVHMRNVPPSPANYAQRSG 1036
            H G + N  + LR++ ++SGE+  +  +    +GID  D+ IV   ++P SP  Y Q +G
Sbjct: 257  HAG-LDNAVKDLRQKRWQSGEVRVMVATNAFGMGIDKPDVRIVLHLDLPDSPEAYFQEAG 315

Query: 1037 RAGRSGQAALVMVYCS 1052
            RAGR G+ A  ++  S
Sbjct: 316  RAGRDGEKAYAVILYS 331



 Score = 33.5 bits (75), Expect = 8e-05
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 70  HQKMKDIFKGYRLHRHQQEAILLGV-EDKEFVVTSGTGSGKSLTYIATIFNHVLNMERTV 128
           +Q++   + GY   R  QE I+  + E K+ +    TG GKS+T+        L  E   
Sbjct: 4   YQEILKQYWGYDSFRDLQEEIITSIGEGKDTLGLMPTGGGKSITFQVP----ALAQEGIC 59

Query: 129 DGRVQGIVVYPMNALINSQFQELQKFEISYL 159
                 IV+ P+ AL+  Q Q L+K EI  L
Sbjct: 60  ------IVITPLIALMKDQVQNLRKREIKAL 84