Pairwise Alignments

Query, 1768 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 374 a.a., putative ATP-dependent RNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 979  GQISNEKRKLREREFRSGEISALFCSPTMELGIDIADLSIVHMRNVPPSPANYAQRSGRA 1038
            G  S   R+     F+SG+   +  +     GIDI +L +V   ++P  P  Y  R GR 
Sbjct: 276  GNKSQAARQSALGNFKSGKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRIGRT 335

Query: 1039 GRSGQAALVMVYCS 1052
            GR+G A + + +CS
Sbjct: 336  GRAGNAGMALTFCS 349



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 78  KGYRLHRH-QQEAILLGVEDKEFVVTSGTGSGKSLTYIATIFNHV-LNMERTVDGRVQGI 135
           KGY +    Q++AI + +  K+ +  + TG+GK+ ++   I  H+ LN        ++ +
Sbjct: 19  KGYTVPTPIQEKAIPVALAKKDILGCAQTGTGKTASFAIPIIQHLHLNKGEGKRSEIKAL 78

Query: 136 VVYPMNAL 143
           ++ P   L
Sbjct: 79  ILTPTREL 86