Pairwise Alignments

Query, 1768 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1693 a.a., ATP-dependent helicase from Bifidobacterium breve UCC2003

 Score = 48.9 bits (115), Expect = 5e-09
 Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 26/183 (14%)

Query: 97  KEFVVTSGTGSGKSLTYIATIFNHVLNMERTVDGRVQGIVVYPMNALINSQFQELQKFEI 156
           +  +V + TGSGK+L    +  + ++ + RT    V+ + V P+ AL     + L++   
Sbjct: 48  RNVLVIAPTGSGKTLAAFLSAIDRLMTVSRTRRAGVRVLYVSPLKALAVDVAKNLEQ--- 104

Query: 157 SYLEGNVYEKINKDGKRPEDIIKELQELTPVRFPIRYKQYTGQEDETERDEIRKNPPHIL 216
             LEG   +              E Q L   +  +  +  +G     ER  I  +PP IL
Sbjct: 105 -PLEGIAAQ-------------CEAQGLPAPKIAVANR--SGDTTAQERRRIASHPPDIL 148

Query: 217 LTNYMMLELMMTRGGKDSEIRGNILANMKYLVFDELHTYRG-RQGSDVSVLIRRIKSAAT 275
           +T    L L++T         G IL  +  ++ DE+H   G ++GS +++ + R+++   
Sbjct: 149 VTTPESLYLLLTSKA------GRILGTVDTVIVDEIHAVAGTKRGSHLALSLERLENLVA 202

Query: 276 QDR 278
           + R
Sbjct: 203 ESR 205



 Score = 47.4 bits (111), Expect = 2e-08
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 977  HTGQISNEKRKLREREFRSGEISALFCSPTMELGIDIADLSIVHMRNVPPSPANYAQRSG 1036
            H G +S E+RK+ E   + GE+  +  + ++ELGID+  + +V   + P S ++  QR G
Sbjct: 464  HHGSVSKERRKMIEERLKRGELRCVVATSSLELGIDMGSVDLVIQIDTPLSVSSGLQRVG 523

Query: 1037 RA 1038
            RA
Sbjct: 524  RA 525