Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1056 a.a., TonB-dependent receptor for (+)-arabinogalactan (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  724 bits (1868), Expect = 0.0
 Identities = 414/1074 (38%), Positives = 609/1074 (56%), Gaps = 55/1074 (5%)

Query: 17   LLLMTLTVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMAS-----TATRAIGMTRDDG 71
            LL M + V      AQ+ I V G V DK + S +P  +++       T  +    T D+G
Sbjct: 9    LLAMAIAVTSVGVRAQD-IPVSGVVKDKSNNSTLPYASVIVKNESGKTVPQLSTTTDDNG 67

Query: 72   TFTVSVPDNATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITVGYGQKTKETV 131
             F+  V     L F +L +  +++K+   ++   + +     + +  + VG+ + +K  V
Sbjct: 68   RFSTKVKSGYRLVFSFLAFDSLSVKVTKPSERMQIYLSPTENMLDETVVVGFKRVSKAAV 127

Query: 132  MGAVTSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSINMRGLSGISVTGSG 191
              +VT ++ +D+ + PV+N  EL Q +VPGLNIQ N G+PG  PS ++RG+S ISV  SG
Sbjct: 128  TASVTVIKAEDLVNTPVANPMELLQGRVPGLNIQMNNGTPGGLPSFSIRGVSDISVQSSG 187

Query: 192  DNAFLTP-TSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDIDEILFLKDASAT 250
            D  F+   T PLFV+DG+P +  T Y      +G  +SPL++IP EDI  I  LKDA+AT
Sbjct: 188  DGEFMMGLTPPLFVVDGIPQEDVTGYDAAGLLSGATVSPLAMIPLEDIANIQVLKDAAAT 247

Query: 251  ALYGAQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAAESNLRLWEIYTY 310
            +LYG++GAYGVILI T+RG++  P + YS NF   TPP+LR V+ G AE  LR+ +I   
Sbjct: 248  SLYGSKGAYGVILIETKRGETAKPKVSYSANFVVKTPPRLRDVLAGGAERALRIMQILGN 307

Query: 311  GANIYSARQSVDNTPMLADSLNAFYNNSTDWQSIFYRSTYNQQHNVNASG-GDDSFNYKI 369
              + Y     +     L+DSLN +YNN+TDWQ +FY++TYNQ HN++ SG  ++ F+YKI
Sbjct: 308  DTSAYHGYNEIHKLQALSDSLNPYYNNNTDWQGVFYQTTYNQTHNLSFSGKPNEKFDYKI 367

Query: 370  NLGYYDEKGIQENTGFTRYSLSMNTRYKPSPKFNVNLILSSSLGNSQKGSGNGILQTGVA 429
            N  YY EKGI +NT F RY +     YKP+ +F+++L L+++L  +  GSGN   Q+GVA
Sbjct: 368  NANYYTEKGIVKNTDFNRYGIRAAVGYKPNDRFHLDLNLATTLTRNSNGSGNAFSQSGVA 427

Query: 430  SGAGSSSLLPGPNLIN-SNAALGALIVDNDNKAGNIKTSVEARYEFLTGLAVSNITSYDY 488
            +G+ +SSLLP P++   SN+AL    V  DN+      S+   Y     +   +   Y Y
Sbjct: 428  AGSAASSLLPPPSMYTASNSALSVFSVQADNQNVVYDASMNIMYLLPFDIRWRSTLGYKY 487

Query: 489  SMGTTETFNPAILNNNVA-----GVYSYNDKRSTLYNRAMVSFNKSLQKDVHNI----GA 539
                 E F P ILN N A       YSYN     +Y R+++S  ++++  + N     G 
Sbjct: 488  GTVENEKFTPGILNANRATWNNGSEYSYN-----MYVRSLLS--RTVKLGIVNFDLQGGF 540

Query: 540  YVFSEVYVRNF-QAHAIQQDQYTNDQYQGPFGSASASSGGGVLDNYSDSRAASLAASLSY 598
             + SE Y  NF   + +  D   +       G  S ++G     +  ++ A  +   LS 
Sbjct: 541  ELSSEKYSGNFIMLNGLASDHIWSS------GMPSMAAGRSNFSDKKNTFALIIDPQLSL 594

Query: 599  NYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKENFLADSKWLDVGMLRLSWG 658
                KY+     R +  SS G  A WA NPSL  +WNF++E+F    K+LD G LR++WG
Sbjct: 595  P-GGKYVFTPNIRPEINSSYGSQAKWAINPSLGFRWNFSRESFAKKWKFLDAGALRVTWG 653

Query: 659  RNIAPVGNVFDANGTYDY-YGNYNGIPTTAVDFNNLPNIKLLPTTTTQYNAGLDLNLFKN 717
            R+     +++D  G+Y+     YNG+    +D N +PN  L P T+T +N G DL+   N
Sbjct: 654  RSTTYKASIYDIWGSYNLSKDTYNGVSIIPIDKNAMPNPDLKPVTSTSWNLGTDLSFLNN 713

Query: 718  RITLNFDTYYKMVDNQLWEKNITTHNAFTKLKTNEVSNVNYGYELALSFRPLPASSKVNW 777
            +I    + YYK +DNQL    +  HNAF  +++ + S VNYG E +L+ RPL   S  + 
Sbjct: 714  KIMFVAEAYYKQIDNQLSSIELANHNAFNSVRSTKTSLVNYGLEFSLNVRPLSRQSNWDL 773

Query: 778  SVSINGAYNKEKITALPDATRQLLLDGGATGQAILYRLGRNSLTNILYNFKGVFSTDDDV 837
            +V+ + A NK+ I  LP+  RQ++     +   ++ +LG N++ N LY +KGV++TD+DV
Sbjct: 774  NVATSLAINKDVIAKLPNEVRQII----NSDAEVVNKLGSNAMGNYLYVYKGVYATDEDV 829

Query: 838  PVNPANGTRYHT-FNGSTPVYFKAGDPYYADINGDYVLDAKDMVGAGNSQPLINGGISSY 896
            PVNP  G R     N ST  YFKAGDP + D+NGDY++D KD V  GNSQP + GGIS  
Sbjct: 830  PVNPLTGERLRMGGNTSTQAYFKAGDPIWVDVNGDYIIDEKDKVIVGNSQPRMTGGISIN 889

Query: 897  ASYKGFSLNVIMAYTWHRDILNNPLAASFQNFSSPFS-------ANNLVPITEYNIWRQS 949
              YK FS+N   ++T  RDI+N  LA  F+ + +P +       +  L PI  YN W + 
Sbjct: 890  LRYKAFSINTNCSFTLRRDIINKALADRFRAYGTPVAGKVNLTGSGALTPIEAYNFWTED 949

Query: 950  GDIANYPNPYDYLRYGSYSATDKSTQFLPFRYNQTLFQEDGSYLKLATVTVGYTFKPELT 1009
               A YPNP+DY R         S+   PFRY+QTLF EDGSY K+  ++V YT   ++ 
Sbjct: 950  NIYAQYPNPFDYTR---------SSIIQPFRYDQTLFMEDGSYFKINGISVAYTIPKKML 1000

Query: 1010 KRLGITSLRVYGTANNIHTFSFYSGADPENVSSLGRDNSGGYPVRRTYALGLNI 1063
                I+  ++  + NNI+TFS YSG +PENV++LG D SGGYP  RT   G+++
Sbjct: 1001 DFFRISRCQLNFSMNNIYTFSKYSGINPENVNNLGYDTSGGYPNGRTVTFGVSM 1054