Pairwise Alignments

Query, 1748 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 996 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (270), Expect = 3e-27
 Identities = 176/766 (22%), Positives = 295/766 (38%), Gaps = 118/766 (15%)

Query: 185 DVKLDIASASVSPASNGGEGIARTYDNNTT-TLYHSNYTGGG-FPISLTYNFTTNP-SID 241
           D+KL + +         G+ I+++YD     T YHS ++    FP++L Y F  N  ++D
Sbjct: 232 DIKLKV-TGGYDTDHQPGQDISKSYDGQFGGTCYHSTWSQSAKFPVTLEYQFDQNQLTLD 290

Query: 242 YITYVPRQDGGSNGIFGTGEIWYKTTTQTTLTKLMDFDTGFSSAAYQISFPAALTNVTQI 301
           YI Y  R     NG FG  E++ K    T    + D+D   +  +++I     +     +
Sbjct: 291 YILYHSRN---GNGNFGAFELYIKPQGSTDFIHIQDYDFKGAGGSHRILLNDPVVPAA-V 346

Query: 302 VVKVLTGKNNFASCAEMQFYQ--KNSAGNLYTNIFADELHTTLKAGITQTDIDAIASPFF 359
             KV +G N+F SC EM+F+   +N        +F D   + L    +   I+ + + FF
Sbjct: 347 QFKVKSGLNDFVSCDEMEFFHAAENPLDEQLITVFTDRSCSELLPDASDEAINRLPA-FF 405

Query: 360 KSLAQCIFNNSY---NKKYRLQTYDFYPNPGTVEGILKSNGLNRVENPTGIAFKANTKAI 416
             LA+ + +N+Y    K++R+Q+Y  Y  P      L++N  + + NPTGI   A  + +
Sbjct: 406 NVLAKSLQSNTYPEAEKRFRIQSYQAYSVPEYWGDKLRTNYYSPLCNPTGIITNAGEEMV 465

Query: 417 VFV-GDTYGVNPQL-LVKDFGLDYSATTDSYPLKKGVNIINVLHDGLAYINYFSDKPNLQ 474
           V   G   G +  L    D G D     +   LK G+N  +    G  ++ Y    P   
Sbjct: 466 VLADGIPQGESISLRCCSDLGPD----GEERFLKNGINKFSFSRAGNLFVIYQKLDPRGM 521

Query: 475 P-IQINITTGQV----------NGYYNPLTDTNDQWTQMLLNGVYSKLD--------MKG 515
           P ++I+     V          N +   +  T+D + + +       LD        +KG
Sbjct: 522 PAVKIHFPPQYVEITEHARVGFNVWDLTVDKTDDLFREYIRKAKSVTLDGSDKCVFVLKG 581

Query: 516 TYVNLNLNKNILISNSAASGKALVAA---YDTIVHNEYTLNGLVKYNRVPKNHMFLRSIT 572
             +     K++L +        +V     +D ++  E  L  +  Y+   + +  +   T
Sbjct: 582 RKILFTALKDLLQNQDNFKQYGVVRGMERWDNLIDWEQELAAIDTYSNTGEFNSLMHVTT 641

Query: 573 GDGNPNASGDGVNYPIGVGGSGSNLASATGVFK---DP----------WGIAHEFGHNNQ 619
                 A+    NY I +     +     G FK   DP          WG  HE GH +Q
Sbjct: 642 FTDGLYAT----NYYINMAAGDVSTKDGWG-FKNNFDPRDMDKNQDNEWGPGHELGHMHQ 696

Query: 620 VRPGAKWIGTTEVTNNVNSAWIQYLYSSSYPSTTRLEKGNDVPKAGAASLY-------GG 672
                 W  TTE +NN+ S ++ Y  +         + G+     G  ++Y         
Sbjct: 697 --GAINWPSTTESSNNLFSNYVVYKIN---------QWGSRGSSIGTLAVYRYAPPTPWS 745

Query: 673 RYGSLFDNCLIQKKHMEAQGDVFVRLVPLWQLEVYYQLAGASKNLPTMQQRLSGTPAPAG 732
           R+    D   +     +   D       L+Q E        ++ L T  +R+   P    
Sbjct: 746 RFMHPRDPNTLAFTPQDMTSD-DANKYGLYQGEASEMHMRLNQQLWTYFERIGKKPNTIR 804

Query: 733 QPDVAFWYGDVLEKMRTTS-QTGLNE-GQLLLNFVSATCDAVQEDLTDFFVKSGYLLPID 790
           +         + E+ RT       N+ G   L +      A   D+T+FF   G+ +P+ 
Sbjct: 805 K---------IFEQGRTPEFWLPFNDPGAAQLMYARNVAKAANMDMTEFFDAWGFFIPVS 855

Query: 791 MDIDDYSIKRLTITQAQIDALIA--------------------AVQAKGYPKPVSPVLNY 830
             +  Y     T+TQ  I+  +A                     V AKG  K +S   + 
Sbjct: 856 FKLYAYGSFSYTVTQDMINQTLAYMKTFSTKCPPIEYIEDRRYQVGAKGNQKGISE--DG 913

Query: 831 ISANTINTFRNKVPLATTAVATVGVTVNTNTLKIDNTKWANAVAFE 876
                  TF+N V +      TV  TV+  T  + N +   AVAFE
Sbjct: 914 GDVGYFETFQNNVKI----TKTVSYTVSGRTYTVTNGE--QAVAFE 953



 Score = 39.3 bits (90), Expect = 2e-06
 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 20/154 (12%)

Query: 36  QGGSEITKAYDGNLT-TMYHSNWSLNA-MPDTVDFYF-VGVKSINKVDYTPRQSGPNGIW 92
           Q G +I+K+YDG    T YHS WS +A  P T+++ F     +++ + Y  R    NG +
Sbjct: 246 QPGQDISKSYDGQFGGTCYHSTWSQSAKFPVTLEYQFDQNQLTLDYILYHSRNG--NGNF 303

Query: 93  TTVDVYYATADAPSVFVSKLSNISWAQNNTVKTIDMTASPIVKPYIVRFVIRAAGGNFSS 152
              ++Y     +      +  +   A  +    ++    P+V P  V+F +++   +F S
Sbjct: 304 GAFELYIKPQGSTDFIHIQDYDFKGAGGSHRILLN---DPVV-PAAVQFKVKSGLNDFVS 359

Query: 153 CAEINFSSAETGPFVQPIDCDNPIAED-FTAYTD 185
           C E+ F  A           +NP+ E   T +TD
Sbjct: 360 CDEMEFFHA----------AENPLDEQLITVFTD 383