Pairwise Alignments

Query, 1748 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 857 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  175 bits (444), Expect = 2e-47
 Identities = 171/637 (26%), Positives = 295/637 (46%), Gaps = 79/637 (12%)

Query: 202 GEGIARTYDNNTTT----LYHSNY-TGGGFPISLTYNFTTNPSIDYITYVPRQDGGSNGI 256
           G+ I  TYD   +T     +H+ +     FP++L Y F  +  IDY+ Y  R     NG 
Sbjct: 148 GQDIENTYDGKFSTDGAAPFHTPWGQSAKFPVTLEYYFKGDTEIDYLIYYTRS---GNGN 204

Query: 257 FGTGEIWYKTTT-QTTLTKLMDFDTGFSSAAYQISFPAALTNVTQIVVKVLTGKNNFASC 315
           FG  +++  T   ++  T   ++D    +A  ++SF   +   T I  +VL+G  +F SC
Sbjct: 205 FGKVKVYTTTNPDRSDYTLQGEYDFKEQNAPSKVSFSEGI-KATGIKFEVLSGLGDFVSC 263

Query: 316 AEMQFYQKNSAGNL---YTNIFADELHTTLKAGITQTDIDAIASPFFKSLAQCIFNNSYN 372
            EM+FY+ N+   L      +F D   T +K  +T   I A+   +F  +A+ + +N+Y+
Sbjct: 264 DEMEFYKTNTDKTLDKQLLTVFTDITCTEIKNNVTNEQIQALPD-YFVRIAEAVRDNTYD 322

Query: 373 K---KYRLQTYDFYPNPGTVEGILKSNGLNRVENPTGIAFKANTKAIVFVGDTYGVNPQL 429
           K   ++R+++Y+ Y N       L +   + ++NPTGI+ KA    IV VGDTYG N  +
Sbjct: 323 KWEKEFRIRSYEPYSNIAEWADKLMTKKYSDLDNPTGISVKAGDDIIVLVGDTYGQNISM 382

Query: 430 -LVKDFGLDYSATT---DSYPLKKGVNIINVLHDGLAYINYFSD--KPNLQPIQINIT-- 481
             + + G +Y  T    D Y L  GVN + +  +G  ++ Y ++      +PI+I+I   
Sbjct: 383 QCIWETGTEYKQTASSGDVYMLNPGVNKLTMKGEGQLFVMYNTELTSNTAKPIKIHIPLG 442

Query: 482 TGQVNGYYN-PLTDTNDQWTQMLLNGVYSKLDMKGTYVNLNLNKNILISNSAASGKALVA 540
           +G VNG+++     T++++ ++L    +    ++G  +    ++N L+     +  + + 
Sbjct: 443 SGTVNGFFDLKEHKTDEKYAELLKKSTHKYFCIRGEKIMFYFHRNKLLEYVPNNILSAIH 502

Query: 541 AYDTIVHNEYTLNGL--VKYNRVPKNHMFLRSITGDGNPNASGDGVNYPIG-VGGSGSNL 597
            +D IV  +  L G+  V+ ++V  NH+F  +I+ +G+   + D   Y IG V     N+
Sbjct: 503 LWDNIVGWQQELMGIDDVRPSQV-NNHLF--AISPEGSYMWASD---YQIGFVYTYLGNI 556

Query: 598 ASATGVF---KDPWGIAHEFGHNNQVRPGAKWIGTTEVTNNVNSAWIQYLYSSSYPSTTR 654
                V     + WG AHE GH +Q      W  +TE +NN+ S +I Y     Y S   
Sbjct: 557 LLEDNVMAAEDNAWGPAHEIGHVHQA--AINWASSTESSNNLFSNFIIYKL-GKYKS--- 610

Query: 655 LEKGNDVPKAGAASLYGGRY--GSLFDNCLIQKKHMEAQGDVFVRLVPLWQLEVYYQLAG 712
             +GN     G  S+   RY  G  + N +    H     +  +R+   WQL +YY    
Sbjct: 611 --RGN-----GLGSVATARYANGQAWYN-MGDATHQNEDTETHMRM--NWQLWIYYHRC- 659

Query: 713 ASKNLPTMQQRLSGTPAPAGQPDVAFWYGDVLEKMRTTSQT-GLNEGQLLLNFVSATCDA 771
                               +    FW   + + MR  + T G + G+  L F      A
Sbjct: 660 --------------------EYKTDFWQ-TLFKLMREVNMTEGEDPGKKQLEFAKMASKA 698

Query: 772 VQEDLTDFFVKSGYLLPIDMDIDDYSIKRLTITQAQI 808
             ++LTDFF   G+  P++  I+ Y   +  ++ A I
Sbjct: 699 ANQNLTDFFEMWGFFEPVNTTIEQYGTYKYYVSDAMI 735



 Score = 47.0 bits (110), Expect = 1e-08
 Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 18/201 (8%)

Query: 21  QNPVTITAAASKRPS-QGGSEITKAYDGNLTT----MYHSNWSLNA-MPDTVDFYFVGVK 74
           +  + +T    K    Q G +I   YDG  +T     +H+ W  +A  P T+++YF G  
Sbjct: 130 EGDIKVTPTGGKASEHQEGQDIENTYDGKFSTDGAAPFHTPWGQSAKFPVTLEYYFKGDT 189

Query: 75  SINKVDYTPRQSGPNGIWTTVDVYYATADAPSVFVSKLSNISWAQNNTVKTIDMTASPIV 134
            I+ + Y  R    NG +  V VY  T    S +  +     + + N    +  +    +
Sbjct: 190 EIDYLIYYTRSG--NGNFGKVKVYTTTNPDRSDYTLQ-GEYDFKEQNAPSKVSFSEG--I 244

Query: 135 KPYIVRFVIRAAGGNFSSCAEINFSSAETGPFVQPIDCDNPIAEDFT--AYTDVKLDIAS 192
           K   ++F + +  G+F SC E+ F    T   +     D  +   FT    T++K ++ +
Sbjct: 245 KATGIKFEVLSGLGDFVSCDEMEFYKTNTDKTL-----DKQLLTVFTDITCTEIKNNVTN 299

Query: 193 ASVSPASNGGEGIARTYDNNT 213
             +    +    IA    +NT
Sbjct: 300 EQIQALPDYFVRIAEAVRDNT 320