Pairwise Alignments

Query, 829 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 811 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  330 bits (846), Expect = 2e-94
 Identities = 235/813 (28%), Positives = 403/813 (49%), Gaps = 42/813 (5%)

Query: 27  LCFLWSKPVCAQTDSAISGIVVMENGSPVEFASVALQDA-DGKGIKGTLTDSLGRFSFPA 85
           L  L  + +     S ISG +   + SP+  A++ L +  D   I GT +D  GRF    
Sbjct: 10  LLMLLIQTISISAQSVISGKITNNDSSPIVGATILLSNGMDSTYITGTTSDLDGRFKMIN 69

Query: 86  LQHGSYRVKISNMGYITHHTDVIQISIQHRV-IGLGRLKLIEDAQTLNAVNISVQKKVIE 144
           ++ G+Y + +S +GY   +   I + I+  + + LG + L ED+  L+ VNI  ++  I+
Sbjct: 70  VKSGNYFLSLSMIGYKKAN---IPLQIKESMNLELGDITLEEDSYILSTVNIIGKRPPIK 126

Query: 145 QSIDKMTINVENSILSEGNTALELLQRVPGIKVDDEGKISLKGRAGVNVMINGKLTYLSP 204
               KMT+N+ +++LS     L+ L+++PG+ V ++G I L G++G NV+++ K+TYLS 
Sbjct: 127 AEPGKMTVNLSSALLSTDGNILDALRKLPGVIVQNDGTIILNGKSGANVLMDDKVTYLSG 186

Query: 205 AELSVLLKGTNSASVSKIELMANPSVKYDAAGNAGIINIVMKKNQMKGLNGSLAVNGGL- 263
             L   L+   ++S+  IEL++ PS K+DA+G++GIINI  KK + +G+  SL  + GL 
Sbjct: 187 ENLINYLRSIPASSIENIELISQPSSKHDASGSSGIINIQKKKIKEQGI--SLTASSGLE 244

Query: 264 -GRKARYGSGFNLNYKNAGFNVYGSYNYAYRGETEYLDFSRRFYNNGHVAGNY------- 315
            G+  +      LN+ +   N+Y  Y+Y Y G+ ++++ S        V+G+Y       
Sbjct: 245 QGKHTKGNENLTLNFHHNKLNMYADYSY-YWGK-DFIELS--------VSGHYLDPMTLK 294

Query: 316 --DRISNQHTETNEPLNTNNFRVGMDVDLDPQNAIG-FLVNGNIGKYLHDSQTSNILQNQ 372
             +   +  ++ N     +  + G+D DL  + AIG +  +  + +   +   S+   N 
Sbjct: 295 PLELRKDFDSDINRQYKGHYIKTGVDYDLSEKIAIGTYFSSSWLNRNKQEVTVSDFFNND 354

Query: 373 QGIIQSDMATTNYDQQHWSNLTYNLNYLHKFKKEARTFSADVDFASNSFTSRLN--LDTY 430
           +    S +   +     ++N+    N ++KF   A+T   D  F    F    N  L ++
Sbjct: 355 KTQSDSTLTALSTPDYSYTNIIGGANMIYKF---AKTGKWDASFDYQLFNQEDNHLLKSF 411

Query: 431 SAPDVSAPAQTSNRKGYVPAKTDVYVGKVDYTDQLGKAIKIESGLKSSFITSDNNLVYQN 490
               +  P +     G       +Y G+ + +  +     I +GLKS F+   ++ +Y+N
Sbjct: 412 FQTGIH-PVKGDTLSGITNGDIKIYSGQTNLSYDISDKFGITTGLKSVFVHISSDALYKN 470

Query: 491 LTDGAWVYDPAGSNYFKYKEQIHAAYLNLNREFKS-FTLQLGLRGEYTHTLG--NQVTTG 547
           L  G W  D   S+ F Y E I+A YL LN ++ + F+ ++GLR E T+T    N     
Sbjct: 471 LIAGDWREDSDLSSSFAYHENIYAGYLQLNAKWSARFSTEIGLRLESTYTKSNYNSAVQD 530

Query: 548 SLIKRNYFQLFPNLALNKTAGENNQFQLAYSRRVQRPDYGDLNPFRVFRDPLLYYEGNPY 607
           S+  ++Y  LFP L +     EN+   +AYSRR+ RP+Y ++NPF   RD  LY +GN  
Sbjct: 531 SVFNQSYVHLFPTLMVQYQLSENHNLSMAYSRRIVRPNYRNMNPFVEVRDQFLYEQGNTE 590

Query: 608 LTPELTQNIVLSHIFKSKYTTALNYSRTTDVITWVSGQIDNLNTTYERPQNLKSLVNYGV 667
           L PEL  NI +S + K +Y+  + YS  +D I+ +S  +++ N     PQNL    ++GV
Sbjct: 591 LRPELIDNIEISWLLKKRYSFNVFYSHRSDPIS-LSFLVEDNNRVLLMPQNLSGNNSFGV 649

Query: 668 SFTGQTNY--FSWWTATNFANIYNNIYRGGEDSGAFKNSQISFTINTQNSFKLGGGYSAE 725
              G  N   F WWT+    ++    +         KN   +  ++  N F L  G+ AE
Sbjct: 650 R-AGLNNLKPFQWWTSHINGSLTYKKFSWATLGKTLKNEVTTPMLHISNQFTLPYGWDAE 708

Query: 726 LNAYYHSKSVYGISTKKSYHSVSVAFQKNLLKDKASLKLLVNDIFQSSQYKQITRYQNID 785
              +Y  + + G +  K   ++S+  +KNL  +K SL +  +DIF S++         + 
Sbjct: 709 ALGFYSGEMIEGQTRVKPLWTISLGVRKNLCNNKFSLYIYAHDIFHSNRPHVSMETNYLY 768

Query: 786 MYSHVNVDGRRVMLSFSYRFGNSFSTKERKRGN 818
             S    D R + +S SYRF      K+ +  N
Sbjct: 769 YASQEKNDSRMIGISLSYRFNRGKEIKKSQNEN 801