Pairwise Alignments

Query, 829 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 896 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  106 bits (264), Expect = 7e-27
 Identities = 172/795 (21%), Positives = 310/795 (38%), Gaps = 99/795 (12%)

Query: 22  IFPLVLCFLWSKPVCAQTDSAISGIVVMENGS--PVEFASVALQDA-DGKGIKGTLTDSL 78
           +  L++ ++ +  + AQT        ++E  +  PVE A++ L    D   +KG  +   
Sbjct: 9   LITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQ 68

Query: 79  GRFSFPALQHGSYRVKISNMGYITHHTDVIQISIQHRVIGLGRLKLIEDAQTLNAVNISV 138
           G+FS   L  G + +KIS +G  T +   +QI+    ++ LG+++L  DA  LN   I  
Sbjct: 69  GKFSLTTLP-GRFLLKISFIGLATEYKP-LQINTTQTIVQLGKIELKPDAVLLNETVIVA 126

Query: 139 QKKVIEQSIDKMTINVENSILSEGNTALELLQRVPGIKVDDEGKISLKGRAGVNVMINGK 198
           Q   +  + D    N     +SEG    EL++++PG ++++EGK+ + G+    +M+NG+
Sbjct: 127 QAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKLPGAEINEEGKLIINGQEVKKIMMNGE 186

Query: 199 LTYLSPAELSVLLKGTNSASVSKIELMANPS-----VKYDAAGNAGIINIVMKKNQMKGL 253
             +L+  + + +LK   +  + +++     S        D      ++++ +K +  KG 
Sbjct: 187 EFFLN--DPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSMRKGW 244

Query: 254 NGSLAVNGG-------LGRKARYGSGFNL--------NYKNAGFNVYGSYN-----YAYR 293
           NG+     G        G   R+ +  NL        N  N+   +  +Y+       Y 
Sbjct: 245 NGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYG 304

Query: 294 GETEYLDFSRRFYNNGH----VAGNYDRISNQHTETNEPLNTNNFRVGMDVDLDPQNAIG 349
           G  E  +  R  ++  H    ++ N  + S Q+ +++   +  +     +  LD    I 
Sbjct: 305 GSIEVRENKRDSWSKRHTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIM 364

Query: 350 FLVNGNIGKYLHDS-QTSNILQNQQGIIQSDMATTNYDQQHWS---NLTYNLNYLHKFKK 405
           +    N  K   +S   S  L N+   I    AT +     +S   +L  N     K + 
Sbjct: 365 YRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNHQTNDRFSTNGSLQLNRKLNSKGRN 424

Query: 406 EARTFSADVDFASNSFTSRLNLDTYSAPDVSAPAQTSNRKGYVPAKT-DVYVGKVDYTDQ 464
            A     D+D          N D YS       + T   K     KT + ++ K+D  ++
Sbjct: 425 IALRLYYDLDDG--------NSDRYSL------SNTYYLKYGDSIKTLNQWIEKLDKNNK 470

Query: 465 LGKAIK-IESGLKSSFITSDNNLVYQNLTD----GAWVYDPAGSNYFKYKEQIHA-AYLN 518
               I  +E    + FI  + N  YQ+ +      A+ +D     Y +Y +  H+  Y N
Sbjct: 471 YQVQITYMEPVFTNRFI--EINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKN 528

Query: 519 LNREFKSFTLQLGLRGEYTHTLGNQV-------------TTGSLIKRNYFQLFPNLALNK 565
                ++      +R  Y + +G +V             TT   + RN     P +    
Sbjct: 529 KYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTTNKSYMRDTTFEYLSRNAINYSPTINFKY 588

Query: 566 TAGENNQFQLAYSRRVQRPDYGDLNPFRVFRDPLLYYEGNPYLTPELTQNIVLSHIFKSK 625
           T  +    ++ Y  R  +P   DL   +   DPL     NP L P    NI  S  F + 
Sbjct: 589 TFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNI--SATFNTY 646

Query: 626 YTTA-------LNYSRTTDVITWVSGQIDNLNTTYERPQN------LKSLVNYGVSFTGQ 672
           +T         L+Y+ T +  T +    +N      +P N      +   + +    + +
Sbjct: 647 FTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNK 706

Query: 673 TNYFSWWTATNFANIYNNIYRGGEDSGAFKNSQISFTINTQNSFKLGGGYSAELNAYYHS 732
               +  T TN+ N         E      N     T N   S +L G Y ++L  +  S
Sbjct: 707 KFTVNTHTNTNYGNSVGFTVLNKESDAVKSN-----TTNLFLSERLKGSYRSDLIDFELS 761

Query: 733 KSVYGISTKKSYHSV 747
             V     +KS HS+
Sbjct: 762 AEV---RYRKSEHSI 773