Pairwise Alignments

Query, 316 a.a., transcription antitermination factor NusB from Pedobacter sp. GW460-11-11-14-LB5

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella amazonensis SB2B

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)

Query: 199 LTEISADWVEDSKFVQDLFVHTLQNDAKYQEMIADRTKNWESERIALMDTILMKMAICEL 258
           LTE   D V D  + ++LF       A+  E +         E ++ ++  ++++A+ EL
Sbjct: 35  LTEQELDGV-DVAYFRELFAGAATKTAQLDEKLKPLLDR-PLEEVSPVEKAILRLAVYEL 92

Query: 259 LNFPSIPVKVTINEYLELSKDYSTPKSNSFINGILDKIL 297
                +P KV INE +EL+K +     + F+NGILDK++
Sbjct: 93  TFRKDVPYKVVINEAIELAKSFGAEDGHKFVNGILDKLV 131