Pairwise Alignments

Query, 316 a.a., transcription antitermination factor NusB from Pedobacter sp. GW460-11-11-14-LB5

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella sp. ANA-3

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 199 LTEISADWVEDSKFVQDLFVHTLQNDAKYQEMIADRTKNWESERIALMDTILMKMAICEL 258
           LTE S D V D  + ++LF        +  E+          + ++ ++  ++++A  EL
Sbjct: 35  LTEQSLDGV-DVAYFRELFAGVATKKTQLDELFIPHLDR-PIDEVSPVEKAIVRLAAYEL 92

Query: 259 LNFPSIPVKVTINEYLELSKDYSTPKSNSFINGILDKIL 297
                +P KV INE +EL+K +   +S+ F+NG+LDK++
Sbjct: 93  TFRKDVPFKVAINEAIELAKAFGADESHKFVNGLLDKLV 131