Pairwise Alignments

Query, 435 a.a., HlyD family secretion protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 416 a.a., putative hemolysin secretion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  173 bits (438), Expect = 1e-47
 Identities = 119/411 (28%), Positives = 217/411 (52%), Gaps = 29/411 (7%)

Query: 35  VIVFCAILMILMMSYVIRYPEFVPATIIVTSHHPPERLQARTDSKVEKIFIKDHQKVRKN 94
           VIVF A+   L+  ++I+YP+ V   I + + +P  RL A +   +  +  K  ++V+K 
Sbjct: 13  VIVFAALF--LLFGWIIKYPDMVTGQIKINAQNPTVRLVANSTGNLLLLSHKAQEEVKKG 70

Query: 95  EVLMVLQSTADYKNMLELKKIVDATSSARLFSFPLQKT--SGFNLGELQGDYNAFAKAFQ 152
           E + V+Q+ A  +++ ++  +++           L+ T      LGE+   Y AF  A +
Sbjct: 71  EYIAVVQNPASTEDVRKIADLINRIDFDGTHLLALKDTFPDKVYLGEINPQYYAFLAALK 130

Query: 153 DEKLFTKLRPYTPEHIAADQNI---VEYRGRIISLKQQKDLERA---RLELTTKNYQRAQ 206
            +  + +   Y  +     +NI   +E++ +I+  ++ +D ++A   R+++  K  +R  
Sbjct: 131 AQCDYLQQNVYEKQR----ENITTSIEWKKKIV--REAEDSQKAAKDRMDVARKWLKRYV 184

Query: 207 KLFGLKVISAIEFENERIK--FLQAQQGLENINISISQAEEGISN-FNKTKSSAIINTEK 263
            L   + I+  E+E ++IK  +L   Q ++NIN  I+     I+  +++ +   +   EK
Sbjct: 185 SL-DQQEIATYEYETDQIKNNYLTTVQEVQNINREIASTRMQITEAYHRLEQLEVEQLEK 243

Query: 264 DKIGFASQTLQLFEQLRKSLKQWEQDYLLVSSTDGMASFQQFWGENQFVKKGDAILSILP 323
           ++     + L   + L  ++  WEQ Y+  +  DG   F +F  + QFV+ G+A+  ++P
Sbjct: 244 ER-ELKVELLSTHQNLIANMAAWEQKYVFKAPFDGKVEFLKFISDGQFVQAGEAVFGVIP 302

Query: 324 DNNKKLIGKMLVSATNSGKIHPGAKVLIKLENYPFQEYGIVEGRVQNISLTPDAE----- 378
             N  + G++L+ A  +GK+   +KV+IKLENYP+ EYG +EG V +ISL    +     
Sbjct: 303 KENH-IYGQVLLPANGAGKVKENSKVVIKLENYPYMEYGYIEGYVSSISLVTQTQKTGEK 361

Query: 379 --GNYYVDVMLPKGLKTSHHESLIFDKELKGKAEIVTHDLRLIERVFYQFR 427
               Y ++V LP GL T++ E+L F  EL G A+I+  D RLIER+F   R
Sbjct: 362 TIETYLINVELPNGLTTNYEETLDFKYELGGTADIIVKDRRLIERLFDNLR 412