Pairwise Alignments

Query, 396 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 134 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 261 LLEEVYAGKSLLTKGTYLYA--RISGFSEQRVQLEINSVHCAGKILPVKLLLYDLDGLPG 318
           +LE +  G  L+   T LY   RI G   QR+ + +NS+   G ILPV+L  YD+DG  G
Sbjct: 1   MLEPLQVGGVLVPANTPLYGTVRIEG---QRMAVTVNSIESGGNILPVELTAYDIDGQAG 57

Query: 319 SYVPASAFREFSKGLGASSVQGFNTMGS--ALDQNEFVMSTASRLFQSTSSAIANMVRKN 376
            +VP +A R   K   A+    F T  S       + VM     +    S  +A  +R+ 
Sbjct: 58  LFVPNTAERTAMKEAAANIGGSFGTSISFARSASQQLVMDVTRGVLGGGSQYLATKMREV 117

Query: 377 RAKLKYNNQVFLVDPR 392
           +  +K N Q+ L+  +
Sbjct: 118 KVSVKANYQLLLISKK 133