Pairwise Alignments

Query, 432 a.a., ABC transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 549 a.a., ubiquinone biosynthesis protein AarF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 8/251 (3%)

Query: 58  SLSELKGSALKIAQMLSMDKNILPKSYVDKFTQSQYNAPPLSGPLIVRTFTKNFGKTPEN 117
           ++ EL    +K+ QMLS  +++L   +  +    Q   PP  G L             E 
Sbjct: 60  AMQELGPVYIKLGQMLSTRRDLLSDEWATELAMLQDKVPPFDGALARLAIEAELKAPIET 119

Query: 118 IFDSFNLSSSNAASIGQVHQATL--NGKKLAVKIQYPGVGDSISSDLKLVKPFA---FRL 172
            FD FN +   +ASI QVH ATL  NGK + +K+  P V   I +DL L+   A     L
Sbjct: 120 FFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLMSQTAKVIDYL 179

Query: 173 LGMSER-ELNIYIKEVEERLLEETDYELEVRRSIEFSEACKNLSHVIFPKYYPELSGKRI 231
           LG   R      I++    +L E + +LE   +I+      +   +  P  Y E    R+
Sbjct: 180 LGEGNRLRPAEVIEDYRVTILGELNLKLEALNAIKLRNNFIDSDALYIPYVYEEFCYPRL 239

Query: 232 ITMDWIDGLHLKEFLQTNPSQALRNKIGQALWDFYNFQQHELRAVHADPHPGNFMITPD- 290
           + M+ I G+ + + +           + +   + +  Q       HAD HPGN  I+ + 
Sbjct: 240 MVMERIYGIPVSDIVALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREN 299

Query: 291 -ENLGVIDFGC 300
            EN   I   C
Sbjct: 300 PENPYYIGLDC 310