Pairwise Alignments

Query, 432 a.a., ABC transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 440 a.a., ABC-1 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  125 bits (313), Expect = 3e-33
 Identities = 100/427 (23%), Positives = 201/427 (47%), Gaps = 17/427 (3%)

Query: 6   SIPTTKVERSAKFVKTGIQIGGNYIKHYSKKLFN---PEMDREQLNEDNATDIYKSLSEL 62
           ++P ++  R A+       + GN      ++L +   P M+   L   NA  I   L+++
Sbjct: 12  AVPNSRAGRMARLGGMAAGVAGNMAFEGGRQLLSGQRPRMEDLLLTPGNAARITAQLAQM 71

Query: 63  KGSALKIAQMLSMDK-NILPKSYVDKFTQSQYNAPPLSGPLIVRTFTKNFGKTPENIFDS 121
           +G+A+K+ Q+LS++  + LP    +     + +A  +    +     ++FG      F  
Sbjct: 72  RGAAMKVGQLLSLEGGDFLPPELAEILGHLRADAHFMPPKQLDSVLKRHFGPGYRGRFAK 131

Query: 122 FNLSSSNAASIGQVHQA-TLNGKKLAVKIQYPGVGDSISSDLKLVKPFAFRLLGMSEREL 180
           F++    AASIGQVH+A T +G+ +A+K+QYPGV +SI SD++ V     RL G+  +E+
Sbjct: 132 FDVRPVAAASIGQVHRAVTKDGRDVALKVQYPGVRESIDSDVRNVGSL-LRLSGLVPKEI 190

Query: 181 NI--YIKEVEERLLEETDYELEVRRSIEFSEACKNLSHVIFPKYYPELSGKRIITMDWID 238
           ++   ++E   +L EE DY  E      F          + P+ Y +L+ + ++ M +++
Sbjct: 191 DLAPLMEEARRQLHEEADYGREAEMLSRFGGLLAGDDRFVVPELYADLTTRDVLGMSFVE 250

Query: 239 GLHLKEFLQTNPSQALRNKIGQALWDFYNFQQHELRAVHADPHPGNFMITPDE-NLGVID 297
            + ++   Q +  Q +R+++ ++L      +  E   +  DP+  N+ + P+   L ++D
Sbjct: 251 SVAIEG--QGDAPQKMRDRLMESLISLMLRELFEFGLMQTDPNFANYRVQPETGRLVLLD 308

Query: 298 FGCIKEMPDDFYYPFFSLISTDVIHDKNKTIDAFRKLDMIHADDSPEQVEFYHQSYREMI 357
           FG  +    D    +  L+      D+     A  ++  +     PE    + +   +M+
Sbjct: 309 FGATRVFGPDLVGQYRGLMRAGFAGDRGAVNAAMEEIGFL----EPETEARHREPILDMV 364

Query: 358 SLFAKPYTSKS-FDFSKPDFFEQLYRYGEKISKMPEFKQARGVKHFIYVNRTNFGLYTIL 416
            +   P  + + FDF+       L R GE+ ++  +F     +   +Y+ R   G++ + 
Sbjct: 365 EMAMAPLRAAAPFDFAGTGLARDLRRAGEEFAEGRDFWVIPPM-DALYLQRKMGGMFLLG 423

Query: 417 HELKATV 423
             L+A V
Sbjct: 424 ARLRAHV 430