Pairwise Alignments

Query, 129 a.a., large-conductance mechanosensitive channel from Pedobacter sp. GW460-11-11-14-LB5

Subject, 148 a.a., putative ion channel (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  113 bits (282), Expect = 1e-30
 Identities = 66/141 (46%), Positives = 85/141 (60%), Gaps = 16/141 (11%)

Query: 4   VKEFKEFAVKGNVLDLAVGVIIGAAFGKIVSSLVEDIITPAV-----------LGPALKA 52
           +++FK FA+KGNV+D+AVGV+IG AFGKIVSSLV ++I P +           L   +KA
Sbjct: 7   LQDFKAFAMKGNVIDMAVGVVIGGAFGKIVSSLVANVIMPPIGLLVGGVNFTDLKWVMKA 66

Query: 53  AGLEDLSKLTIAGTAIKYGNFLSQVITFIIVAFVLFLIIKGANNLKKKEA-----VAPTV 107
           A +    K      ++ YG FL     F+I+AF +FL I+    L  K+A      AP  
Sbjct: 67  AEVGADGKEIAPAVSLDYGQFLQATFDFLIIAFAIFLFIRLITKLTTKKAAEEAPAAPPA 126

Query: 108 APVPTKEEVLLTEIRDLLKAK 128
            P PTKEEVLLTEIRDLLK K
Sbjct: 127 PPAPTKEEVLLTEIRDLLKEK 147