Pairwise Alignments

Query, 244 a.a., DNA-binding response regulator from Pedobacter sp. GW460-11-11-14-LB5

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 6e-34
 Identities = 78/223 (34%), Positives = 124/223 (55%), Gaps = 17/223 (7%)

Query: 5   ILIDDEPLARDIVKYYLSD-HAEIEIVAECGDGFEGLKAITLHKPDLIFLDIQMPKISGF 63
           +L DDEPL R  +   L++    +EIVA   +G   L+AI  H+PD++FLDI+MPK+ G 
Sbjct: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68

Query: 64  EMLELVEDKPAV---IFTTAFDEYAIKAFEVNAVDYLLKPIDKSRFDAALKKLPNKLNQN 120
           E+   +  +P V   +F TA+DEYA+ AFE +A+DYLLKP+  SR  +  +KL  +L +N
Sbjct: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128

Query: 121 ---ENTEAVLDA------AALSPAQNNRVVVKKDGVIKIIPVADINYLEADDDYVKLSTT 171
               N  A L +        + P     +   K   I +I V ++ Y++A+D Y+ L   
Sbjct: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188

Query: 172 DGA----FYKNKTMAYFEQTLDVSQFIRIHRSYIINLAQVTKI 210
            GA    +    ++      LD +QF +IHRS ++N+ ++ K+
Sbjct: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKV 231