Pairwise Alignments

Query, 188 a.a., SMC-Scp complex subunit ScpB from Pedobacter sp. GW460-11-11-14-LB5

Subject, 198 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.4 bits (228), Expect = 4e-24
 Identities = 57/167 (34%), Positives = 99/167 (59%), Gaps = 6/167 (3%)

Query: 10  IEALVFSSSQSIGTQEIILALNAVFNEEFTEAQVFESVEQIKEKYSHDDFAIELVFLNNG 69
           IEA +F   + +  + +   + A F+   +  ++  ++E++++ Y   +  ++LV +  G
Sbjct: 12  IEASLFVLGKPLSVKMLKETVLADFS--VSRDKIKAALEELQQDYQ--ERGVQLVKVAGG 67

Query: 70  YQFLTKKDYHETVNQLQLHRSKKKLSQAAMETLAIIAYRQPITKLEIEQIRGVN-SDYSV 128
           Y+F T +     +  L   ++ K  S+A +ETLA+IAYRQP+T+ +IEQ+RGV  S + +
Sbjct: 68  YRFQTLEVLSPFLQPLWQEKAPK-YSRATLETLAVIAYRQPVTRGDIEQVRGVAISSHII 126

Query: 129 QRLLEKELISIDGKAETPGRPILYSTSTLFMDYFGLNNLNQLPQLKD 175
           + L ++  I + G  E PGRP LY+T+  F+ YFGL+ L  LP L D
Sbjct: 127 KSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYFGLDTLADLPALTD 173