Pairwise Alignments

Query, 165 a.a., RNA polymerase subunit sigma-24 from Pedobacter sp. GW460-11-11-14-LB5

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Klebsiella michiganensis M5al

 Score = 73.2 bits (178), Expect = 2e-18
 Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 6   KLFKEIFDSNSKKIFHLCYGYTGDTDAANDLLQETFLKVWQNLDKFRNKSLISTWIYRIA 65
           K F  +      K+  L   Y    D A D++QE+F+K W+ LD FR  S   TW+YRIA
Sbjct: 20  KAFNLLVVRYQHKVASLVSRYVPPGDIA-DVVQESFVKAWRALDSFRGDSAFYTWLYRIA 78

Query: 66  VNTCLTYLRSE-KRQAKDELTDNIIEN-----------KVEEFSEKNEQVALLYKCISKL 113
           VNT   YL ++ +R    ++  N  EN             E      E   ++++ I  L
Sbjct: 79  VNTAKNYLVAQGRRPPSSDVDANDAENFESGGALKEISNPENLMLSEELRQIVFRTIESL 138

Query: 114 EENDRLIITM-VLDELPYHEIADISGISEGNLRVKIHRIKQKL 155
            E+ R+ IT+  LD + Y EIA I     G +R +I R ++ +
Sbjct: 139 PEDLRMAITLRELDGMSYEEIAAIMDCPVGTVRSRIFRAREAI 181