Pairwise Alignments

Query, 452 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Pedobacter sp. GW460-11-11-14-LB5

Subject, 478 a.a., tRNA modification GTPase TrmE (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  252 bits (644), Expect = 2e-71
 Identities = 163/478 (34%), Positives = 258/478 (53%), Gaps = 26/478 (5%)

Query: 1   MNNQDTIIALSTPSGSGAIGVIRLSGPEAISLTNAVF--AGKDLEKQASHTLHFGLVKDG 58
           M  + TI A++TP G G +G+IR+SGP++ ++   +F  A          TLH G   D 
Sbjct: 1   MRQEGTIAAIATPPGHGGVGIIRISGPDSHAILGRLFLPASPRFAGFRPWTLHRGRACDA 60

Query: 59  DHI-VDEVVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLISKGARAAKPGEFTLRA 117
               +D+V+A     P+++T E+V EI CHG   ++  ++    + GAR A  GEFT RA
Sbjct: 61  MGAPLDDVLAVAMPGPRTFTGEDVAEIHCHGGPAVLAAVLEAACACGARLAGRGEFTRRA 120

Query: 118 FLNGAFDLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELD 177
           FLNG  DL+QAEAVA++IA+ ++    +A  +++G     +  LR +L+   + + + +D
Sbjct: 121 FLNGRMDLTQAEAVAEMIAAPAQGGLRLAQARLQGLLGTRVAELRARLLDLRAQLCVAVD 180

Query: 178 FAEEDVEFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNA 237
           F E++V+    E      + +   ++ L+S+ E G   + G  +V+AG  N GKS+L+NA
Sbjct: 181 FPEDEVDCLAPEAFVAECDAVAAGVRGLLSAHERGRCWQEGALVVLAGHVNAGKSSLMNA 240

Query: 238 LLNEERAIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQ 297
           LL   RAIV+D+ GTTRD IE+ + + G+  R +DTAG+RDT DI+E  GV  + + + Q
Sbjct: 241 LLGRRRAIVTDMPGTTRDFIEEPVQLAGLPVRLVDTAGLRDTGDIVEQEGVRISRDLVAQ 300

Query: 298 AKLIIYMADAAQSISEIE-EQIRGLK----QLAIP------YLILVNKADLMADAQR--- 343
           A L++ + DAA  +   E E +R ++    Q+  P       L+++NK DL A+A     
Sbjct: 301 ADLVLLVVDAAAGLGHAERELLRHVRDQHAQVGRPGRPGGRVLVVLNKTDLAAEASAAFR 360

Query: 344 --KAFEALEVVFISAKEKQGIDELKTTLLEQV-------NLHHINTSETLVTNIRHVEAL 394
                E    V +SA    G+DEL       V       +      S  L  N+R  + L
Sbjct: 361 CPTEVEGCPCVAVSALRGLGVDELAAAARAMVLAGLGGDDAGGEPESGDLAPNLRQAQVL 420

Query: 395 KQTEHALQRVLANVDNPVTSDFLAMDIKQALHYLGEITGTVTTDDLLENIFTKFCIGK 452
           ++    L  ++A+V   V  D  ++ +  A   L EITG  T  ++LE+IF+ FCIGK
Sbjct: 421 RRALDELDALVADVRAGVPYDLCSVRLDGACAVLSEITGETTPAEVLEHIFSSFCIGK 478