Pairwise Alignments

Query, 452 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Pedobacter sp. GW460-11-11-14-LB5

Subject, 453 a.a., tRNA modification GTPase TrmE (RefSeq) from Shewanella sp. ANA-3

 Score =  271 bits (692), Expect = 4e-77
 Identities = 160/454 (35%), Positives = 254/454 (55%), Gaps = 10/454 (2%)

Query: 5   DTIIALSTPSGSGAIGVIRLSGPEAISLTNAVFAGKDLEKQASHTLHFGLVKDGDHIVDE 64
           DTI+A +T  G G +G+IR+SG +A  +  AV       + A +            ++D+
Sbjct: 4   DTIVAQATAPGRGGVGIIRISGDKATDVAMAVLGHLPKPRYADYC---DFKNASGQVIDQ 60

Query: 65  VVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLIS-KGARAAKPGEFTLRAFLNGAF 123
            +A  F  P S+T E+V+E+  HG   ++  +I  ++  +G R AKPGEF+ +AF+N   
Sbjct: 61  GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVEGIRIAKPGEFSEQAFMNDKL 120

Query: 124 DLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELDFAEEDV 183
           DL+QAEA+ADLI + S+ +   A+Q ++G F+ E+  L +Q+ H    +E  +DF +E+V
Sbjct: 121 DLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEEV 180

Query: 184 EFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNALLNEER 243
           +F +  ++ N + KI   L  + +S + G++I+ G+ +VIAG+PN GKS+LLNAL  +E 
Sbjct: 181 DFLSDGKIANALYKIIDKLSAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES 240

Query: 244 AIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQAKLIIY 303
           AIV++IAGTTRD + + + + G+    IDTAG+RDT D +E +G+ER   ++  A  +++
Sbjct: 241 AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINSADRVLF 300

Query: 304 MADA----AQSISEIEEQIRGLKQLAIPYLILVNKADLMADAQRKAFE-ALEVVFISAKE 358
           M D     A    +I           +   ++ NKADL  +      E    V  ISAK 
Sbjct: 301 MVDGTTTDAVDPHDIWPDFINRLPANLGVTVVRNKADLTGENLAMTEEKGYSVYRISAKT 360

Query: 359 KQGIDELKTTLLEQVNLHHINTSETLVTNIRHVEALKQTEHALQRVLANVDNPVTSDFLA 418
             G++ELK  L   +  +  N     +   RH+EAL      LQ     ++  +  + LA
Sbjct: 361 GLGVEELKQHLKSLMG-YKSNLEGGFIARRRHLEALDVAASHLQLGKEQLEIYLAGELLA 419

Query: 419 MDIKQALHYLGEITGTVTTDDLLENIFTKFCIGK 452
            +++ A   L EITG  T+DDLL  IF+ FCIGK
Sbjct: 420 EELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK 453