Pairwise Alignments

Query, 966 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1033 a.a., TonB-dependent receptor for alpha-mannan (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  370 bits (949), Expect = e-106
 Identities = 264/905 (29%), Positives = 431/905 (47%), Gaps = 43/905 (4%)

Query: 79   DHDVPVLFGTQKNVKRIQSSATVSGEELKSFPTPQVGLMLYGKLPGLYVVQNNFQLGSDE 138
            D  V    G Q+      +   V  ++L +  +  +   L G +PG+  +Q + + G + 
Sbjct: 112  DEVVITASGLQQKKTLTGAITNVDVKQLNAVGSSSLSNSLAGVVPGIIAMQRSGEPGENT 171

Query: 139  PAISLRGRTP-------LVVIDGVPRSYLSIDPEQIESISVIKDALGTALYGMKAADGML 191
                +RG +        LV+IDGV R++  I P+ IES SV+KDA  TA+YG + A+G++
Sbjct: 172  SEFWIRGISTFGAKSGALVLIDGVERNFDEILPQDIESFSVLKDASATAIYGQRGANGVI 231

Query: 192  LITTKRGANMPKQITFTSQYGIQQQIERPKFLDAFNYATLFNEALANDGRQAIYTAADLD 251
            LITTKRG     +I   + +     ++ P++   +++A L NEA        IYT  +L+
Sbjct: 232  LITTKRGEKGKVKINVKAGFDWNTPVKVPEYASGYDWARLANEARLGRYDSPIYTPEELE 291

Query: 252  KYKNGTNPFTHPNVNWTDEILKATAPVSRQNLNLRGGSNKVRYFVDLDYLSQSGFLVTDP 311
              ++G +   +PN++W D +LK+ AP    N++  GGS+ VRY+V   Y S+ G   T  
Sbjct: 292  IIRSGLDTDLYPNIDWRDLMLKSGAPRYYANISFSGGSDNVRYYVSGQYTSEQGRYKTFS 351

Query: 312  SINTYETNNSFKRYSFRSNIDVDLTNSTTLSLSLFGRIRNSNQPGSTIASIYSTLLTTPN 371
            S N Y TN +++RY++R+N+D+++T +T L +S+ G + N   P  +   I+        
Sbjct: 352  SENKYNTNTTYERYNYRANVDMNITKTTVLKVSVGGWLVNRTTPTRSTGDIWEDFAKFTP 411

Query: 372  NAYPKFNENGSLGGNTEFQNNLYGMSIKSGYRPSVNRNLGADVSLMQKLDTFLPGLYASG 431
             + P+    G            Y M+ + GY       +   V L Q L    PGL   G
Sbjct: 412  LSTPRKWSTGQWPRVDGQDTPEYHMT-QRGYHTKWESKVETSVKLEQDLKFITPGLKFEG 470

Query: 432  AISFNSYYNENINRSKSFAVYSP----------VINPVTNQT---SYKTIGGDGTQSNSS 478
              +F++Y    I R K   V+            ++  V N++     K + GD      +
Sbjct: 471  VFAFDTYNENIIKREKKEEVWEAQKYRDENGKLILKRVVNRSPMNQNKEVRGDKRYYFQA 530

Query: 479  SPTDLNQQIFSRFDLGYDKTIDKNTFKAQLLFIRDSYVLGGALSQVNQSLGGRFNYDYDN 538
            S  D N+       +G    + +   K  + F  DS  L G++ + N +  GRF Y Y +
Sbjct: 531  S-LDYNRLFAHAHRVGVFGMVYQEE-KTDVNF--DSSDLIGSIPRRNLAYSGRFTYAYKD 586

Query: 539  KYLLELATSYMGYDRYKAGDQWGFFPSVGLGWNIASESFFANLKNTVNSLKLRTSYGLTA 598
            KYL E      G + ++ G Q+GFFP+V  G+ I+ E+F       ++  K+R SYG   
Sbjct: 587  KYLAEFNWGCTGSENFEHGKQFGFFPAVSAGYVISEEAFMKKALPWIDQFKIRASYGEVG 646

Query: 599  TNAAAG-YFQYLQNFDNGD-TFYSRNPLTTSSTKDE--GPLANPNITWEKAKKFNIGLDV 654
             +   G  F Y+   D  D   YS     T+  +      L  PN+TWE AKK+++G+D 
Sbjct: 647  NDVLDGRRFPYVSLIDTDDGGSYSFGEFGTNRVQAYRIRTLGTPNLTWEIAKKYDVGVDF 706

Query: 655  SMLKDKVWLTADYYRNSYYDL-LQTRRTNASAVIGAVLPPENIGKNQYSGIELGLGYQNQ 713
            S    K+    D++ +   D+ +Q +    +  +    P  N+GK +  G E  +G+   
Sbjct: 707  SFFNGKISGALDWFLDKRDDIFMQRKHMPLTTGLADQTPMANVGKMKSYGWEGNIGFTQS 766

Query: 714  INNFRYFITANGSWSASKVIFNDEPFRKNAYEYRTGQPVGQTFGYVADGFYNNTAEINNG 773
            I      + AN ++  + +I  DE   +  Y+   G  + Q+ G +A G + +  EI+  
Sbjct: 767  IGQVNLQLRANFTYQTTDIIDKDEAANELWYKMDKGFQLNQSRGLIALGLFKDQDEIDRS 826

Query: 774  PKVDGYLPV-PGDLKYKDLNNDGIINTYDMTAIGSTK-PVFFYGLTGGINYKGLDFSFTL 831
            PK     P+ PGD+KYKD+N DG+IN  D+  +G  + P   YG+    N++  + S   
Sbjct: 827  PKQTSNRPILPGDIKYKDVNGDGVINDDDIVPLGYREVPGLQYGVGLSANWRNWNLSVLF 886

Query: 832  NGKANRNVYFNFINFASTGAAGGYGQALESSL--LRWTPATAS--------QAEYPRLSV 881
             G    + +F   N      +  YG  L++ +   RW P   S         A++P L+ 
Sbjct: 887  QGTGKCD-FFIGGNGPHAFRSERYGNILQAMVDGNRWIPKEISGTTATENPNADWPLLTY 945

Query: 882  GNNPNNSQVSSFWVKNGNYLRLRNVEIGYSLPGHLIKLIGLTNVRVFANGLNLLTATTLD 941
            GNN NN++ S+FW+    YLRLRNVE+ Y  P    +   ++N+R+   G NLLT     
Sbjct: 946  GNNDNNNRKSTFWLYERKYLRLRNVEVSYDFPQTWTRKFFVSNLRLGFVGQNLLTWAPFK 1005

Query: 942  GVDPE 946
              DPE
Sbjct: 1006 MWDPE 1010