Pairwise Alignments

Query, 966 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1027 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  448 bits (1152), Expect = e-129
 Identities = 303/947 (31%), Positives = 479/947 (50%), Gaps = 78/947 (8%)

Query: 79   DHDVPVLFGTQKNVKRIQSSATVSGEELKSFPTPQVGLMLYGKLPGLYVVQNNFQLGSDE 138
            D  V V +G QK    + + + VS +EL   P   +   + GK+ G+   Q +   G+D+
Sbjct: 100  DEVVVVGYGAQKKESVVGAISQVSSKELLKSPAANISQAIAGKISGVITSQTSGAPGADD 159

Query: 139  PAISLRGRT-------PLVVIDGVPRSYLSIDPEQIESISVIKDALGTALYGMKAADGML 191
              I +RGR        PL+++DGV R +  I P+ IESIS +KDA  TA+YG++ A+G++
Sbjct: 160  MKIYIRGRASFAGDNQPLILVDGVEREFSQIAPDDIESISTLKDASATAVYGVRGANGVM 219

Query: 192  LITTKRGANMPKQITFTSQYGIQQQIERPKFLDAFNYATLFNEALANDGRQAIYTAADLD 251
            LITTKRG      ++ T+ + IQ    +  +LD++N   L  EALANDG  + Y+A+D++
Sbjct: 220  LITTKRGKEQKPTVSLTANWQIQSPTRQDTYLDSYNSVVLLEEALANDGLPSQYSASDIE 279

Query: 252  KYK-------NGTNPFTHPNVNWTDEILKATAPVSRQNLNLRGGSNKVRYFVDLDYLSQS 304
             YK       +G +   +PNV+W D +L+ +AP  R N+N++GG+ ++RYF   +Y +Q 
Sbjct: 280  MYKRASAGQLSGIDALLYPNVDWYDTVLRNSAPAQRYNVNIQGGTKRMRYFTSAEYYNQQ 339

Query: 305  GFLVTDPSINTY--ETNNSFKRYSFRSNIDVDLTNSTTLSLSLFGRIRNSNQPGS----- 357
            G L  + S + Y  ++N+SFKR++FR+N+D  +T   TLS++   R      P S     
Sbjct: 340  G-LFKEFSQDEYGNKSNSSFKRFAFRANLDFLMTKDLTLSVNFGTRFEERRGPNSNESRD 398

Query: 358  -TIASIYSTLLTTPNNAYPKFNENGS-------LGGNTEFQNNLYGMSIKSGYRPSVNRN 409
             T +  +  +  TP   +P     G          G++++QNN+     K+G+  S N  
Sbjct: 399  GTYSQAFYEMNHTPGWLFPVSYTVGEGEDQKTLYSGSSQYQNNIVARFAKAGFYRSTNTI 458

Query: 410  LGADVSLMQKLDTFLPGLYASGAISF--NSYYNENINRSKSFAVYSPVINPVTNQTS--- 464
               +  +  K++    GL A G +SF  ++YY    N    FA Y   +N  TN  S   
Sbjct: 459  NETNFIVDYKMNWLTKGLAAKGMLSFDYDAYYRRAFN--ADFATYE--LNDRTNYNSIDA 514

Query: 465  YKTIGGDGTQSNSSSPTDLNQQIFSRFDLGYDKTIDKNTFKAQLLFIRDSYVLGGALSQV 524
            Y     D   +   +      +++  F L + +   K+   A  L+ ++ Y     L++ 
Sbjct: 515  YTQFNTDTELAYLGNDQTTTYKLYMEFQLNWARKFGKHDITAMALYNQNDYRYQADLAER 574

Query: 525  NQSLGGRFNYDYDNKYLLELATSYMGYDRYKAGDQWGFFPSVGLGWNIASESFFANLKNT 584
             Q L GR  Y YD++YL E+   Y G + +  G ++GFFPS  +GW I++E+F    +  
Sbjct: 575  YQGLVGRATYGYDDRYLAEVNFGYNGSENFMRGRRFGFFPSFSVGWRISNEAFMKGTEEW 634

Query: 585  VNSLKLRTSYGLTATNA------------AAGYFQYLQNFDNGDTFYSRNPLTTSSTKDE 632
            +N+LK+R SYG    +              A + Q   ++  G T Y      T   + +
Sbjct: 635  LNNLKIRASYGEVGNDVYKVNGVKQRFLYQAVWTQIANDYHFGTTGY------TGIYESQ 688

Query: 633  GPLANPNITWEKAKKFNIGLDVSMLKDKVWLTADYYRNSYYDLLQTRRTNASAVIGAVLP 692
             P  N  +TWE+A K+N+GL+  +    +    D +     D+L    T    V G  + 
Sbjct: 689  YP--NYAVTWERAHKYNLGLEFGLWNGLLNGNIDVFYEKRNDILTPYLTRPQWV-GVNMA 745

Query: 693  PENIGKNQYSGIELGLGYQNQI-NNFRYFITANGSWSASKVIFNDEPFRKNAYEYRTGQP 751
              N+G+    G E+ L + N I  +F Y  +   S + +++   DEP  K AY  + G P
Sbjct: 746  AGNLGETNNKGFEIELKHANHIGKDFTYNASLTFSHARNEIRNMDEPATKTAYRKQEGHP 805

Query: 752  VGQTFGYVADGFYNNTAEINNGP---KVDGYLPVPGDLKYKDLNNDGIINTYDMTAIG-S 807
            + Q FG V DGF    A++NN        G + V GDLKY+D+N DG I++ D T IG S
Sbjct: 806  INQYFGLVCDGFVTQ-ADLNNPDFPVSTFGNVQV-GDLKYRDMNGDGFIDSRDETFIGYS 863

Query: 808  TKPVFFYGLTGGINYKGLDFSFTLNGKANRNVYFNFINFASTGAAGGYGQALESSLLRWT 867
              P   Y L+ G  YKG+ FS    G  + + Y+   +  +  A    G+  E  L RW 
Sbjct: 864  DVPENTYALSLGCEYKGIGFSIMFQGVDHVSRYY---DAEAMYAFVNGGKVKEHHLNRWN 920

Query: 868  PATA-----SQAEYPRLSVGN-NPNNSQVSSFWVKNGNYLRLRNVEIGYSLPGHLIKLIG 921
            P  +     + A YP L   +   +N + +SF++KNGN+LRL+N+E+ YSLP   I+ + 
Sbjct: 921  PNQSEAYNLTHASYPLLHYDSYGDHNQRKNSFFLKNGNFLRLKNIELSYSLPARWIRKVA 980

Query: 922  LTNVRVFANGLNLLTATTLDGV-DPEVLIGN-VPNQRIFNFGVNLQF 966
            +   RV+ N  NL+T   LDG+ DPE    N  P  +  NFGVN++F
Sbjct: 981  MNECRVYVNANNLITWDKLDGLCDPESEGSNRYPIMKTVNFGVNIKF 1027