Pairwise Alignments

Query, 462 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 547 a.a., alpha-L-fucosidase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 23/204 (11%)

Query: 266 WESCLTIGQNWGYNK---HDSVWKSPEMLVRHLVEVVANGGNLLLNVGPKGDGTFPDWAT 322
           W+SC  +G  W YN    +++ +KS   +V+ LV++V+  GNLLL+V  + DGTF +   
Sbjct: 355 WQSCSCLG-GWHYNTSIYNNNQYKSAADVVKLLVDIVSKNGNLLLSVPLRADGTFDEKEE 413

Query: 323 ERLKAVGKWMDINQEAIYASHPWLAVKENSNEKSDNSSIEESKNAIKDAVFDGTPKSVTP 382
           + L   G WM+IN+EAIY + PW    E      D   ++ +     +  +    K+   
Sbjct: 414 KILNEFGNWMNINKEAIYQTRPWKIFGEGPIADKD---VQLNAQGFNEWAYS---KADAK 467

Query: 383 DVYYTAKDKNVYVFLRSWQKPGVQLKQINKSL--------LSVKNIELLGNNKKIEWTIN 434
           ++ +T  DKN+Y  +  W + G   K + +SL          +  +ELLG   K+ +T  
Sbjct: 468 EIRFTQTDKNLYATVLGWPEDG---KILIRSLAEGNGLYPTKIGRVELLGYG-KVSFTRT 523

Query: 435 NEGLNLNLPVDFKKGNQIPVYVLK 458
           ++GL +++P    K N  PV  ++
Sbjct: 524 DKGLVVDIPAKSLK-NIAPVLKIR 546



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 28  FKAEKFGLFLHWGLYA-QTAGDWKGHRV------KGGEHFMLYERIPVQEYGAIANQFNP 80
           F+  KFG++ HWG    + +GDW    +      +   H   Y       +  I   +  
Sbjct: 55  FRNVKFGIWAHWGPQCVEGSGDWMARSLYMENSPEYRHHIANYGHPSEFGFKDIIPLWKA 114

Query: 81  IKFDADAWVKKAKETGMKYIVFTAKHHDGFAMYNSASSDYNIVKRSPFKRDPVAALAKAC 140
            K+D D  V   K+ G +Y      HHD   +++S    +N V   P K+D +    +A 
Sbjct: 115 EKWDPDKLVAFYKKIGAQYFFALGNHHDNMDLWDSKYQPWNSVNMGP-KKDILKGWERAA 173

Query: 141 KKYNI 145
           +K+ +
Sbjct: 174 RKHGL 178