Pairwise Alignments

Query, 432 a.a., RNA helicase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  101 bits (251), Expect = 5e-26
 Identities = 82/343 (23%), Positives = 161/343 (46%), Gaps = 12/343 (3%)

Query: 1   MSLDKLKLSKPLVAAMTDAGFLTPKEIQARTMSRILGGQDVIAVGPEGSGKTTTYVLATL 60
           MS D L L+  ++ A+ + G++ P  IQ + +  +L G+D++A    G+GKT  + L  L
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  MKLKYAFEEAP-----RALILVPDAEHVDHVLEQFKLLNRNSTFRILGIDSRGAVDTQMN 115
             L      A      RALIL P  E    + E  +  ++    R L +    +++ QM 
Sbjct: 61  QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM 120

Query: 116 EITDGCDIIVAVPDRARALYLKLALNTNKIQLFIVDNAELIVKKGLQLPVVE-LANSAYK 174
           ++  G DI+VA P R   L  + A++ +K+++ ++D A+ ++  G    +   LA    K
Sbjct: 121 KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 175 SQHVVFTEVMHEKLNHMISPFMKDSTTTIEVDEIGEKQAEVYQQMLYQVPNFRTKLNLLT 234
            Q+++F+    +++  +    + +    +E++      A      L    + + K  LL+
Sbjct: 181 RQNLLFSATFSDEIKSLAEKLLHN---PLEIEVARRNTASEQVSQLVHFVDKKRKRELLS 237

Query: 235 LLLNDTEVFDKVVVFVNTRLTAQTVYKNFNQHKEGEISIYRSLFFDDKGYDDIEDFKDNP 294
            ++ +   + +V+VF  T+  A  + +  N+      +I+ +          + DFK   
Sbjct: 238 QMIGEGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNK-SQGARTRALADFKSG- 294

Query: 295 DARVLIVANENLGELNIEGIPFILHFELPEQKETLIQRIVKHG 337
             RVL+  +     L+IE +P ++++ELP   E  + RI + G
Sbjct: 295 GIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTG 337