Pairwise Alignments

Query, 863 a.a., DNA gyrase subunit A from Pedobacter sp. GW460-11-11-14-LB5

Subject, 901 a.a., DNA gyrase subunit A (RefSeq) from Shewanella amazonensis SB2B

 Score =  820 bits (2117), Expect = 0.0
 Identities = 437/903 (48%), Positives = 609/903 (67%), Gaps = 71/903 (7%)

Query: 13  IIQINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDLGVTSNKPHKKSA 72
           I  INIE+++K++Y+DY+MSVIV RALPDVRDGLKPVHRRVL+ M +L    NKP+KKSA
Sbjct: 8   ISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWNKPYKKSA 67

Query: 73  RIVGEVLGKYHPHGDASVYFTMVRMAQDWSLRYPMVDGQGNFGHIDGDSPAAMRYTEARF 132
           R+VG+V+GKYHPHGD++VY T+VRMAQ +SLRY +VDGQGNFG IDGD+ AAMRYTE R 
Sbjct: 68  RVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAMRYTEIRM 127

Query: 133 SKIAEEMLADINKDTVDFQLNFDDTLQEPTVLPAKIPNLLVNGSSGIAVGMATNMAPHNL 192
            K+A E+LAD+ K+TVDF  N+D T Q P VLP KIPNLLVNG+SGIAVGMATN+ PHNL
Sbjct: 128 EKLAHELLADLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMATNIPPHNL 187

Query: 193 TEVIDGVVNYIDNRDITIEELMKFVKAPDFPTGGIIYGYTGVKEAFETGRGRIVMRAKAE 252
           TEV+ G +  I+  +++IE+LM+++  PDFPT  II G  G++EA+ TGRG+ +MRA+AE
Sbjct: 188 TEVVKGCLALIEEPELSIEQLMEYIPGPDFPTAAIINGKKGIEEAYRTGRGKAIMRARAE 247

Query: 253 IESIKD--REVIIVTEIPYQVNKAQMIERTAELVGEKKLEGISNIKDESNKDGIRIVYEI 310
           +E I+D  RE IIVTEIPYQVNKA++IE+ AELV +KK+EGIS ++DES+KDG+RIV EI
Sbjct: 248 VE-IEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGMRIVIEI 306

Query: 311 KRDANASIVLNNLYKYTALQTSFSVNNIALVKGRPQMLNLKDLIVHFVDHRHDVIVRRTR 370
           KR     +VLNNLY  T +Q+SF +N +AL  G+P++ NLK+++  F+ HR +V+ RRT 
Sbjct: 307 KRGEVGEVVLNNLYAQTQMQSSFGINMVALANGQPKLFNLKEMLEAFILHRREVVTRRTV 366

Query: 371 YELAEAEKRAHILEGYLIALDHLDEVIKLIRASETPEDARLGLMEK-------------- 416
           YEL +A  RAHILE   +AL ++D +I LI+AS +P DA+ GL+ K              
Sbjct: 367 YELRKARDRAHILEALAVALANIDPIIALIKASASPSDAKAGLIAKGWELGTVKAMLEKA 426

Query: 417 -------------FGLSD-------IQARAILDMTLRRLTGLERDKIKEEYAELMKTIEH 456
                        FG+ D        QA+AILD+ L +LTGLE +KI +EY EL++ I  
Sbjct: 427 GDDAARPEWLEPEFGIRDGLYFMTEPQAQAILDLRLHKLTGLEHEKILQEYEELLEIIAG 486

Query: 457 LKSILADEGLRMQIIKDELAEIRQKFGDERRTTIVHSAEDMSMEDFIDDEEVVITISHEG 516
           L  IL      M++IK+EL  I ++FGD RRT I  SA D+S+ED I++E+VV+T+SH G
Sbjct: 487 LLHILRSPERLMEVIKEELELILEQFGDNRRTEINASAVDISLEDLINEEDVVVTLSHLG 546

Query: 517 YVKRTPATEFKAQGRGGKGSKGSTSRNEDFIEHMLVATAHNYMLFFTEAGRCFWLRVYEI 576
           Y K  P T+++AQ RGGKG   +  ++EDF+E +LVA  H+ +L F++ G+ +WL+VY++
Sbjct: 547 YAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKLYWLKVYQL 606

Query: 577 PEGSRTSKGRAIQNIINIPKEEKIKAYIKVKNLKDQEYLENNFIIMCTKKGTIKKTSLEA 636
           P  SR ++GR I N++ + + E+I A + V+     EY E  +I+M T  GT+KKT+L  
Sbjct: 607 PLASRQARGRPIVNLLPLQEGERITAILPVR-----EYEEGKYILMATSHGTVKKTALTE 661

Query: 637 YSRPRVNGINAININDGDVLLEACLTNGESEIVMALRSGRAIRFNEST------------ 684
           YSRPR NGI A+N+ DGD L+   +T+G SEI++   +G+ +RF E              
Sbjct: 662 YSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEGEEVAVVDENGNPV 721

Query: 685 -------------VRPMGRTATGVRGVRLAHDQDEVVGMIAVNNPEVTVLVVSEKGYGKR 731
                        VRPMGR ATGVRG+ L   Q  VV +I V   +  +L V+  G+GKR
Sbjct: 722 LDEEGKPQINFKGVRPMGRGATGVRGIALEEGQ-RVVSLI-VPKDDSAILTVTANGFGKR 779

Query: 732 TDIEDYRVTNRGGKGVKTINVTEKTGQLVSIKDVTDSEDLMIINRSGIVIRIPVSALRVM 791
           T++ +Y   +R  KGV +I VTE+ G +V    V +++++M+I+  G ++R P   + ++
Sbjct: 780 TELAEYPAKSRATKGVVSIKVTERNGPVVGAVQVGENDEIMLISDKGTLVRTPAIGVSII 839

Query: 792 GRATQGVRLISLKGDDEIASVTKIDHEEDEEETVDLTDVVVTDGEEV-EADTTPETDDTE 850
           GR TQGV +I    D+ +  + +ID  +D+        V   +G+ + EADT P TDD  
Sbjct: 840 GRNTQGVTIIRTADDETVVGLQRIDEIQDDGSEYLEEGVEGAEGDIIAEADTQP-TDDAN 898

Query: 851 EEA 853
           +EA
Sbjct: 899 DEA 901