Pairwise Alignments
Query, 863 a.a., DNA gyrase subunit A from Pedobacter sp. GW460-11-11-14-LB5
Subject, 913 a.a., DNA gyrase, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12
Score = 676 bits (1744), Expect = 0.0
Identities = 367/876 (41%), Positives = 534/876 (60%), Gaps = 79/876 (9%)
Query: 16 INIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDLGVTSNKPHKKSARIV 75
I+I E+MKS+Y+DY+MSVIVSRA+PD+RDGLKPVHRR+LY M + G T K ++KSAR V
Sbjct: 25 ISIAEEMKSSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHETGNTHEKAYRKSARPV 84
Query: 76 GEVLGKYHPHGDASVYFTMVRMAQDWSLRYPMVDGQGNFGHIDGDSPAAMRYTEARFSKI 135
G+V+GKYHPHGD+++Y +VRMAQD+S+ P++DGQGNFG +DGD+PAAMRYTE R K
Sbjct: 85 GDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYTEVRMDKP 144
Query: 136 AEEMLADINKDTVDFQLNFDDTLQEPTVLPAKIPNLLVNGSSGIAVGMATNMAPHNLTEV 195
A +LADI K+TVDFQ N+D +EPTVLPA+ PN+LVNG+ GIAVGMATN+ PHNL EV
Sbjct: 145 AAALLADIEKETVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEV 204
Query: 196 IDGVVNYIDNRDITIEELMKFVKAPDFPTGGIIYGYTGVKEAFETGRGRIVMRAKAEIES 255
ID + I+ D+ +E+LM+++ APDFPTGG I G G ++A+ GRG +++RAK IE
Sbjct: 205 IDATLALIETPDLEVEDLMQYIPAPDFPTGGQILGRGGARKAYLEGRGSVIIRAKTRIEE 264
Query: 256 I-KDREVIIVTEIPYQVNKAQMIERTAELVGEKKLEGISNIKDESNKDGIRIVYEIKRDA 314
+ KDR I++ EIPYQVNK+ MIE+ AELV EK++EGI++++DES++ G+R+V E+KRDA
Sbjct: 265 LRKDRYAIVLDEIPYQVNKSSMIEKIAELVREKRIEGIAHVQDESDRVGVRVVIELKRDA 324
Query: 315 NASIVLNNLYKYTALQTSFSVNNIALVKGRPQMLNLKDLIVHFVDHRHDVIVRRTRYELA 374
+VLN LY++T +QTSF N +AL GRP+ L LKD + F+ R +V+ RRT Y+L
Sbjct: 325 TPEVVLNQLYRFTPMQTSFGCNMLALNGGRPEQLTLKDFLSSFISFREEVVARRTAYDLR 384
Query: 375 EAEKRAHILEGYLIALDHLDEVIKLIRASETPEDARLGLMEK------------------ 416
+A +R+H+L G +A+ ++DEV+ IRAS +AR LM +
Sbjct: 385 KARERSHVLCGLAVAVSNVDEVVATIRASADAAEAREKLMTRRWPAADIADYIRLIDDPT 444
Query: 417 --------FGLSDIQARAILDMTLRRLTGLERDKIKEEYAELMKTIEHLKSILADEGLRM 468
+ LS+ QARAILD+ L+RLT + ++ +E EL I+ IL M
Sbjct: 445 HTMNEDGTYNLSETQARAILDLRLQRLTQIGVKEVTDELQELAAKIQEYLDILRSRSRIM 504
Query: 469 QIIKDELAEIRQKFGDERRTTIVHSAEDMSMEDFIDDEEVVITISHEGYVKRTPATEFKA 528
II DEL E++ +F RRT I + DM ED I+ E++V+T++ GY+KRTP EF+A
Sbjct: 505 AIISDELREVKDQFAVPRRTEITDWSGDMEDEDLIEREDMVVTVTSGGYIKRTPLVEFRA 564
Query: 529 QGRGGKGSKGSTSRNEDFIEHMLVATAHNYMLFFTEAGRCFWLRVYEIPEGSRTSKGRAI 588
Q RGGKG G ++ +D + + VA H +L FT G + L+ + +P G R ++G+A+
Sbjct: 565 QRRGGKGLAGMATKEDDVVTTLFVANTHTPLLVFTTDGMVYKLKTWRLPSGGRNARGKAL 624
Query: 589 QNIINIPKEEKIKAYIKVKNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRVNGINAI 648
N++ I I A + V + +E + I+ T G +++ +L ++ NG A+
Sbjct: 625 VNVLPIDPGTSIAAIMPVD--RAEEDWADLQIVFATSAGDVRRNALSDFTNVMRNGKIAM 682
Query: 649 NINDGDVLLEACLTNGESEIVMALRSGRAIRFNESTVRPM-GRTATGVRGVRLAHDQDEV 707
+ +G L++A + + E ++++ GRAIRF + VR GR +TGVRGVRLA + D V
Sbjct: 683 KLPEGVSLVKARICSEEDDVMLVTALGRAIRFRTTDVRVFKGRDSTGVRGVRLA-EGDRV 741
Query: 708 VGMIAVNN------------------------------------------------PEVT 719
V M + + E
Sbjct: 742 VSMAVIRHFVADPQERAAYLKMRRAVAGLSEEAESEDEDTVEAGQLSPERYAEMSAAEDL 801
Query: 720 VLVVSEKGYGKRTDIEDYRVTNRGGKGVKTINVTEKTGQLVSIKDVTDSEDLMIINRSGI 779
+L ++E G GK + DY V RGG+GV ++ + G LV+ V + +M+ +G
Sbjct: 802 ILTITEGGTGKISSSHDYPVRGRGGQGVTAMDKAMRGGPLVACFPVEIDDQIMLATSTGQ 861
Query: 780 VIRIPVSALRVMGRATQGVRLISLKGDDEIASVTKI 815
IR PV + RA GV++ + +++ SV I
Sbjct: 862 SIRCPVDGISFRSRAAGGVKVFNTAPGEQVVSVAYI 897
Score = 45.8 bits (107), Expect = 1e-08
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 717 EVTVLVVSEKGYGKRTDIEDYRVTNRGGKGVKTINVTEKTGQLVSIKDVTDSEDLMIINR 776
E V+ V+ GY KRT + ++R RGGKG+ + T++ + ++ L++
Sbjct: 542 EDMVVTVTSGGYIKRTPLVEFRAQRRGGKGLAGM-ATKEDDVVTTLFVANTHTPLLVFTT 600
Query: 777 SGIVIRIPVSALRVMGRATQGVRLISLKGDD---EIASVTKIDHEEDEEETVDLTDVVVT 833
G+V ++ L GR +G L+++ D IA++ +D EE+ DL V T
Sbjct: 601 DGMVYKLKTWRLPSGGRNARGKALVNVLPIDPGTSIAAIMPVDRA--EEDWADLQIVFAT 658
Query: 834 DGEEV 838
+V
Sbjct: 659 SAGDV 663