Pairwise Alignments

Query, 281 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 239 a.a., integrase catalytic subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  166 bits (420), Expect = 5e-46
 Identities = 97/229 (42%), Positives = 137/229 (59%), Gaps = 9/229 (3%)

Query: 41  PRTGVRKLHVMLRESMSRKNMWVGRDKLFGILRSQHLLVQRKRKYTRTTDSKHWMRKYPN 100
           PR G RKL  +L +      + +GRD+LF  LR+  LLV  KR Y +TT S H  R +PN
Sbjct: 12  PRVGTRKLQYLLNKM---HQIVIGRDRLFRCLRAHRLLVTPKRAYHKTTHSHHRFRCHPN 68

Query: 101 LTK----DLELTMPEQLWVSDITYLQTVAGNEYLHLVTDAGSKLIMGYEVCGDMKAVSTK 156
           L K     ++++  EQ+WV+DITYL       YL LVTDA S+ I+GY V  ++K     
Sbjct: 69  LLKPSEQQVDISRSEQVWVADITYLSLQDNEAYLSLVTDAWSRKIVGYHVDDNLKTDGVL 128

Query: 157 KALEMAISKREYEHQ-LIHHSDRGLQYCSYDYIRLLSHNNITISMTENGDPYENAVAERV 215
            A + A+ +R+ + + LIHHSDRG+QYCS  Y  + + + +T SMT+  D Y+NA+AERV
Sbjct: 129 TAYKRALRQRQDKSKPLIHHSDRGIQYCSNAYQAVHAQHGVTCSMTDGYDCYQNALAERV 188

Query: 216 NGILKDEFGLDAVFKGKAQLYKQVHQAIELYNQMRLHSSVNMLTPRQAH 264
           NGILK EF L        +  + V +A+ +YNQ R H ++   TP + H
Sbjct: 189 NGILKQEF-LTHKPATLEEARQMVAEAVAIYNQRRPHLALKYKTPDEVH 236