Pairwise Alignments

Query, 281 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 267 a.a., integrase catalytic subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  214 bits (546), Expect = 1e-60
 Identities = 119/259 (45%), Positives = 162/259 (62%), Gaps = 1/259 (0%)

Query: 8   TKQAFYKARSNSSKKTVAEQEIKEMVLNIRHKLPRTGVRKLHVMLRESMSRKNMWVGRDK 67
           ++Q  Y+A +    +      IK+ V   R  +PR G RKL+ +++  +   N+ +GRD 
Sbjct: 2   SRQGIYQAVARMESRRAELSVIKDWVQYWRKYMPRLGARKLYTLIKSKLVEHNIKLGRDG 61

Query: 68  LFGILRSQHLLVQRKRKYTRTTDSKHWMRKYPNLTKDLELTMPEQLWVSDITYLQTVAGN 127
            F  LRS+ LLV+ K+ YT+TT SKHWM+K+PNL K+  L     + VSDITYL++  G 
Sbjct: 62  FFTYLRSEGLLVKPKKSYTKTTFSKHWMKKHPNLLKEEGLHDAGHVLVSDITYLESDQGV 121

Query: 128 EYLHLVTDAGSKLIMGYEVCGDMKAVSTKKALEMAISKREYEHQLIHHSDRGLQYCSYDY 187
            YL LVTDA S+ I+G+ V  DMKA S  KAL+MAI  + Y    +HHSDRGLQYCS  Y
Sbjct: 122 HYLSLVTDASSRKIVGHHVSKDMKAESVVKALKMAIKDKRYIGNAVHHSDRGLQYCSAVY 181

Query: 188 IRLLSHNNITISMTENGDPYENAVAERVNGILKDEFGLDAVFKGKAQLYKQVHQAIELYN 247
              L  + I  SMT+  D Y+NA+AERVNGILK EF L    +  A+L   V ++I +YN
Sbjct: 182 QNALQASQIQPSMTDGYDCYQNALAERVNGILKQEFLLHRC-RTFAELKILVRESIAIYN 240

Query: 248 QMRLHSSVNMLTPRQAHSK 266
            MR H S+NM +P Q H++
Sbjct: 241 NMRPHLSLNMDSPNQVHNR 259