Pairwise Alignments

Query, 617 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 994 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  103 bits (257), Expect = 4e-26
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 13/257 (5%)

Query: 366 IRKNLKRIHKLNEQMANQNNQMRETLNALEQSQADNTNMLKIVAHDLRSPIAGIYSITSL 425
           I +N  R+H+ N ++A    + RE L+ L+      T     ++H+LR+P+  I      
Sbjct: 187 IAENNLRLHQANAELARLYEKTRE-LDELK------TQFFANISHELRTPLTLILGPVGK 239

Query: 426 MIEERGRSDGDQKMLRVIQSSSKDSLELVNDLLQTQFKTE----MLSKQPIDLAEMLRYC 481
            + +   +   ++ L V++ +++     VNDLL    K E    ++     DLA + R  
Sbjct: 240 HLADPDLAPALRRDLEVVERNARMLYRHVNDLLDVA-KLEAGRMVMHYTEGDLAHLTRVI 298

Query: 482 VSLLQSNIEAKGQHLILHVKPVILL-ASREKLWRVISNLITNAIKFSPNEATIEVRMEEG 540
            S   S  E +    ++   P +      EK  R++ NL++NA KF+ +   I++R+   
Sbjct: 299 ASHFDSLAEGRRVRYVVTTPPDLTAQVDAEKYQRILLNLLSNAFKFAGDGGAIQLRLTAA 358

Query: 541 AGYLRIGVADEGIGIPVEIEDKIFDMFTEARRPGTAGEQPFGLGLAISRQIVKAHGGKIW 600
            G  RI V D G GIP  + +++F+ F +     +      GLGLAI R++ + HGG + 
Sbjct: 359 GGQARIEVEDNGPGIPEAMREQVFEPFRQVEGGSSRHHGGTGLGLAIVRELAQLHGGSVR 418

Query: 601 FERKPVSGTIFFIELPV 617
            +  P SG +F +ELP+
Sbjct: 419 IDAAPSSGALFTLELPL 435



 Score = 62.4 bits (150), Expect = 9e-14
 Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 21/255 (8%)

Query: 373 IHKLNEQMANQNNQMRETLNALEQSQADNTNMLKIVAHDLRSPIAGIYSITSLMIEERGR 432
           IH+LN   A+   ++ E    L  +  +  +    V+HDLR+P+  I   +  +IE+ G 
Sbjct: 734 IHRLN---ADLERRVEERTAELRAANRELDSFAHAVSHDLRAPLRAITGFSRAIIEDHGT 790

Query: 433 ---SDGDQKMLRVIQSSSKDSLELVNDLLQTQFKTEMLSKQPIDLAEMLRYCVSLLQSNI 489
              ++  + +  +I S  +    +   L  ++   E L +  IDL+ + R  +  L  + 
Sbjct: 791 ALPAEAREFLDHIIASGQQMGALIEGLLTLSRSSREELRRDDIDLSALARRILEELARS- 849

Query: 490 EAKGQHLILHVKP-VILLASREKLWRVISNLITNAIKFSPNEAT--IEVRMEEGAGYLRI 546
              G  +   V+  ++       +  V+ NL+ NA K++   A   I V        ++ 
Sbjct: 850 -EPGHRVAWQVEDGLVARGDIRMIGVVLRNLLGNAWKYTARTAAPLIRVHARRQEKQIQF 908

Query: 547 GVADEGIGIPVEIEDKIFDMFTEARR----PGTAGEQPFGLGLAISRQIVKAHGGKIWFE 602
            +AD G G  +    K+F  F    R    PG       G+GLA  +++V  HGG I   
Sbjct: 909 CIADNGAGFDMAQVGKLFQPFQRLHRQDEFPG------IGIGLATVQRVVHRHGGSIEAR 962

Query: 603 RKPVSGTIFFIELPV 617
            +   G  F   LP+
Sbjct: 963 GEAGHGASFCFTLPL 977