Pairwise Alignments

Query, 1066 a.a., hydrophobe/amphiphile efflux-1 family RND transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1048 a.a., transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  728 bits (1878), Expect = 0.0
 Identities = 393/1047 (37%), Positives = 621/1047 (59%), Gaps = 23/1047 (2%)

Query: 1    MFQKF-IDRPVLSTVISILLVIVGILGLTKLPLERFPNIAPPSVLVTAVYPGANAETILR 59
            MF KF IDRP+LS VI I+LV++G++ L  LP+ ++P+I PP+V V A+YPG+N+  +  
Sbjct: 1    MFAKFFIDRPILSNVIGIVLVLIGVVSLIMLPISQYPDITPPTVEVKAIYPGSNSLVLAD 60

Query: 60   SVTPSLEEAINGVENMTYMTSSASNDGTLAITVYFQQGTNPDQAAVNVQNRVSQATSQLP 119
             V   +E+ +NGVE+M YM+S ++NDGT  +T+ F  GT+ D A V VQNRV+ A ++LP
Sbjct: 61   VVGAPIEQEVNGVEDMLYMSSKSANDGTYTLTITFALGTDIDMATVLVQNRVNVAMARLP 120

Query: 120  AEVVQYGITTTKQQNSFIGAIGVYSEDPKKYDAVFVNNYAQINIIPELKRIPGVGSASVF 179
             EV + G+T  K+  + +  + + S D   YD +F++N+A + +  +L RIPGVG A VF
Sbjct: 121  DEVKRQGVTVKKKSTAILQVVTLTSPDGS-YDDLFLSNFASLRVRDDLARIPGVGEAMVF 179

Query: 180  GGIKDYSMRIWLNPSQLATYKITPNEVITAIQDKNLEAAPGRFGER---SSEAFEYIIKY 236
            G    YSMR+WL+  +L +  +T  +V+ AI ++N++ A G+ G +    ++ F++ ++ 
Sbjct: 180  GAAS-YSMRVWLDAPRLKSLGLTTRDVLNAISEQNVQVAAGQIGAQPAPDTQNFQFTVQT 238

Query: 237  KGKLTKPEEYQNIAIRS---NADGSILRLKDVARVELGAYSYGSVNRLNGHDGITIGVIQ 293
            +G+L++  E+++I IR+      G  +R++DVARVELG  +Y    + NG     + + Q
Sbjct: 239  QGRLSEVSEFEDIIIRTATGGPTGRTVRVRDVARVELGGQTYDLYAQKNGKPASLVIIYQ 298

Query: 294  LSGSNANEIQIAIDKLLAKLSKDFPAGIKHNQFYRTKTDLDESINQVEHTLIEAFLLVFI 353
            L G+NA ++   +   + ++ KDFPAG+  +  Y T   ++ +I QV HTL EA +LV  
Sbjct: 299  LPGANALDVAQKVTATMQRIGKDFPAGVAWDIPYDTTRFVEAAIEQVYHTLFEAAVLVLA 358

Query: 354  VVFIFLQDFRSTLIPAIAVPVAIIGTFFFMQLFGFSVNLLTLFALVLAIGIVVDDAIVVV 413
            V+ IFLQD+R+TL+PA  VP+ I+G F  M   GFSVNL+TLF ++LAIGIVVDDAI+VV
Sbjct: 359  VILIFLQDWRATLVPATVVPITILGGFMAMMALGFSVNLVTLFGIILAIGIVVDDAIIVV 418

Query: 414  EAVHAKMEENPSLSPRAATTEAMNEITGAIISITLVMAAVFLPVGFMTGSTGIFYKQFAL 473
            E     ME   S   R AT +AM ++ G II ITLV++ VFLP  FM+G TG  Y+QFAL
Sbjct: 419  EGAAHHMEHGDSA--RDATVKAMVQLFGPIIGITLVLSCVFLPASFMSGITGQLYRQFAL 476

Query: 474  TMAIAIIISAVNALTLSPALAALFLKNKHAEGGHHAPKKGFVEKFYAGFNGGFNYMTNRY 533
             +A   ++SA+ A T++PA  ALFLK      G +A        FY GFN  ++ +   +
Sbjct: 477  VIASTALVSALLAATMTPAQCALFLKP--IVPGRNA--------FYRGFNKVYDAVERFF 526

Query: 534  IGGLRVLIRNKWISMGGLALIVLVTIFLVGRTKTGFIPTEDQGFVAIAVASPSGTSLANT 593
            +  L  ++ + W +M     ++ VT +      TGF+P EDQG+  +AV  P  +S + T
Sbjct: 527  VALLTTMVHHAWTTMLVFVGLISVTFWFFSTLPTGFLPDEDQGYALVAVQLPGASSQSRT 586

Query: 594  NKILKQAEAELRAMPSARFVMSLAGYNFLTASNSPSAGQIFLLLKPNDERGAVKNIDEIQ 653
             ++  + +A L   P     ++  G + L  +N+P++  IF++ K   ERG +   D++ 
Sbjct: 587  REVTARLDAILAETPGVANWITFGGMSILNNANTPNSATIFVMYKDWSERGDLTQ-DKLV 645

Query: 654  NIVRAKMAAISAGTFFVFSFPTVPGFSNVEAMNVMLQDKTNGRLDKFSGVANNFIAKLMA 713
              +R K   I  G   V + P + G  N     +M+QD+           A   +     
Sbjct: 646  ADLRRKTGTIQEGMVLVVTPPPIQGLGNAGGFEMMVQDRAATGAQALENAAYQMLGAGGG 705

Query: 714  KPAIAYAFTSYKADYPQLQLDVNDEKADQLGVSKKDILQTMQTYFGTAQASDFNRFGKYY 773
            +  ++   T+Y A  PQL +DV+  K    GV   D+  TMQ Y G++  +DFN+FGK Y
Sbjct: 706  QSGLSGVATTYTARTPQLYVDVDRTKVKDHGVQLSDVFSTMQAYLGSSYVNDFNKFGKAY 765

Query: 774  RVVVQADVADRTDPASIDRVFVKNKSGESVPISTLVKLTRVYGSETASRYNLFNSIEVNA 833
            +V VQAD   R +   I ++ V+N  G  VP+  +  +  V G +  +RYNL+ +  +  
Sbjct: 766  QVRVQADSRYRLEAGDIGQLEVRNADGRMVPLGAMTSVRDVVGPDVVTRYNLYPAASLIG 825

Query: 834  IPKPGFSSGDAIKAIEETAREQLPTGYAYEFSGQTREEISSGGQSTVIFLLCLVFVYFLL 893
               PGFSSG A+  +E+ AR  LP+   +E++    +E ++G ++  +F L ++ V+ +L
Sbjct: 826  SAAPGFSSGQALALMEDMARRTLPSTMGFEWTTMAYQEKATGNEAFAVFGLAVLLVFLVL 885

Query: 894  SAQYESYILPLAVILSIPTGVFGVFVVLGLTGIENNIYVQVALIMLIGLLAKNAILIVEF 953
            +AQYES+  P A+IL +P  + G  + +   G++NN+Y Q+ +++LI L +KNAILIVEF
Sbjct: 886  AAQYESWSAPAAIILVVPLALLGTCIAVSARGMDNNVYTQIGIVLLIALASKNAILIVEF 945

Query: 954  AVQ-RRKAGLSLVNAAIEAARLRIRPIIMTSLAFVFGLFPMSIATGPSAQGNHSISIGAA 1012
            A + R   G+S+  AA+E AR R+RPI+MTS AF+ G+ P+  A+G  +    ++     
Sbjct: 946  ARELRMHKGMSIPEAAVEGARARLRPILMTSFAFILGVVPLLTASGAGSASQRALGTAVF 1005

Query: 1013 GGMVSGVILGLFIIPVLFVIFQALQEK 1039
            GGM++   L +  +PV F + Q L E+
Sbjct: 1006 GGMLASTFLAVMFVPVFFTVIQRLSER 1032