Pairwise Alignments

Query, 534 a.a., sensor histidine kinase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 401 a.a., putative two-component system sensor protein, no kinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)

Query: 274 PKEIEKYTARYMLAITLDEENYTKKELYSYALIAAFIIGLNFLLILHAIKKRNKKKLAEN 333
           P  I  +T RY++                + +IA  ++G N  + L     R+++ L E 
Sbjct: 164 PYPIPPFTIRYLI----------------HCVIAFLMVGFNIAVKLFFKSFRDEEMLKEL 207

Query: 334 EQQKNTAKLQLNSIRSQLNPHFLFNALSGIQNLMNKNEIDNANKYLSKFARLTRNVLDD- 392
           E Q+  ++LQ   ++ Q+NPHF  N L+ I  L++  +   A   + + ++L R VL + 
Sbjct: 208 EHQRLQSELQY--LKYQINPHFFMNTLNNIHALVDI-DTGKAKSTIVELSKLMRYVLYEA 264

Query: 393 -KELISLSQEKTLLDDYLQMEQLRFGFKYEIYYSDNLALENVEIPSMLLQPFVENAVKHG 451
             + I LS+E   L++Y+ +  LR+  K  I  +  L +  V+IP +L   FVENA KHG
Sbjct: 265 SNKTILLSREVQFLENYVTLMSLRYPEKVSIEKNFPLEVPEVQIPPLLFISFVENAFKHG 324

Query: 452 ISKKGTDGKIMITFTKQANDLVLTVADNGNGFNIEKKNNGLGLQLSDSRIKLL 504
           +S +      ++   ++ N L      N  G + +++++G+GL+    R++LL
Sbjct: 325 VSYRKESFVHVVMQLEEGNRLAFR-CTNSTGTSSDEQHHGIGLENIRKRLRLL 376