Pairwise Alignments

Query, 446 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 605 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  117 bits (293), Expect = 1e-30
 Identities = 104/378 (27%), Positives = 169/378 (44%), Gaps = 72/378 (19%)

Query: 53  FIHWGPVSLRGTEIGWSRGEQVPTEDYDNLYKEFNPVLFDADAIVKTAKDAGMKYLTITA 112
           F+H+   +  G E  W  G++ P     NL   FNP   DA+  V   K+AG K + +TA
Sbjct: 66  FLHFSINAFTGRE--WGDGKEDP-----NL---FNPTELDAEQWVSNLKEAGFKMVILTA 115

Query: 113 RHHDGFCLWPTAYTDFNITNTPYKK---DIVGALNEACKKQGIKFCIYYSVLDWHHPDYP 169
           +HHDGFCLWPTA T  ++ ++ +K    D+V  L +ACKK G++F +Y            
Sbjct: 116 KHHDGFCLWPTATTKHSVASSSWKNGQGDVVKELRKACKKYGMRFGLYL----------- 164

Query: 170 IHSPKNQTIDPKSDMSRYVVYMKNQLKELITKY-DPYMLWFDG-QWEKPWTDEMGKD--- 224
             SP ++  +   D  RY  +   QL EL+T Y + + +WFDG   E P   +   D   
Sbjct: 165 --SPWDRNAECYGDSPRYNKFFIRQLTELLTNYGEVHEVWFDGANGEGPNGKKQVYDWDT 222

Query: 225 LYAYLKNLKPTIII------------NNRLGKEF--------------AALENKNIDVSK 258
           +Y  +  L+P  ++             + LG+E               A   NK + ++ 
Sbjct: 223 VYETIHRLQPKAVMAIMGDDIRWVGNESGLGRETEWSTTVLTPEIYARADKNNKKLGING 282

Query: 259 MIGDYDTPEQVVGKLNM-QMPWESCFTICNQWAW--KANDKMKPLKQCLEIISKTAGGNG 315
              D  + + +     +   P E   +I   W +  + ++K+K LK   +I  ++ G N 
Sbjct: 283 QSNDLGSRKMLEKATELFWYPSEVDVSIRPGWFYHKEEDNKVKSLKHLADIYFQSVGYNS 342

Query: 316 NLLLNVGPMPDGRIEARQIERLKEIGDWLK--------TNGEAIYGTLGGPYQPNGEYAT 367
            LLLN+ P   G I    ++RLKE   + K          G+  + T  G    N +   
Sbjct: 343 VLLLNIPPDHRGLIHEADVQRLKEFAAYRKQVFADNYVKKGKKYWNTASG----NEKIYQ 398

Query: 368 TRKGNKIYLHVLNSSLTK 385
            + G++I + +L   +TK
Sbjct: 399 LKAGSEINVVMLQEDITK 416