Pairwise Alignments

Query, 446 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 463 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  153 bits (386), Expect = 1e-41
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 34/345 (9%)

Query: 13  INRITLVCVLAFTMALQVAAQSKNNKPSPINDFMDKRFGMFIHWGPVSLRGTEIGWSRGE 72
           + R+ L+ +L  T  L + AQ+K+       +F+D R GMFIH+   +    +  W   +
Sbjct: 1   MKRLFLLMILGVTSVLCLNAQTKSLHQLQ-QEFVDLRCGMFIHFNMPTFFNED--WPDPD 57

Query: 73  QVPTEDYDNLYKEFNPVLFDADAIVKTAKDAGMKYLTITARHHDGFCLWPTAYTDFNITN 132
             P        + FNPV  D     K AK A M Y  +T +HH GFC+W T  TD+++ +
Sbjct: 58  AAP--------ELFNPVRMDCKQWAKAAKSANMTYGCLTTKHHSGFCIWDTKTTDYSVMS 109

Query: 133 TPYKKDIVGALNEACKKQGIKFCIYYSVLDWHHPDYPIHSPKNQTIDPKSDMSRYVVYMK 192
           +P+K+D+V    +A + +G+K  +YYS+LD H             + PK    +++  +K
Sbjct: 110 SPFKRDVVKEYADAFRAEGMKVMLYYSILDTH-----------ARLRPKCITPQHIEMIK 158

Query: 193 NQLKELITKYDPYMLWFDGQWEKPWT-----DEMGKDLYAYLKNLKPTIIINNRLGKEFA 247
            QL+EL+T Y          W+ PW+     D   +D+Y  +K+++P  ++ +    ++ 
Sbjct: 159 EQLRELLTNYGEITALIIDGWDAPWSRISYDDVPFEDIYRLVKSIQPNCLVMDLNAAKYP 218

Query: 248 ALENKNIDVSKMIGDYDTPEQVVGKLNMQMPWESCFTICNQWAWKANDKMKPLKQCLEII 307
           A      D+           Q + K   ++P  SC  +   W WK +    P+K   +++
Sbjct: 219 AEALFYTDIKSY---EQGAGQHISKDTNRLPALSCLPLQQNWFWKESFPTTPVKSPAQMV 275

Query: 308 SKTAGGNG----NLLLNVGPMPDGRIEARQIERLKEIGDWLKTNG 348
           +      G    N +LNV P  DG ++A  ++ LKEIG   K +G
Sbjct: 276 NDNIIPMGKSYCNFILNVAPNRDGLMDANALKALKEIGKLWKNDG 320