Pairwise Alignments

Query, 446 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 460 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 42/329 (12%)

Query: 47  DKRFGMFIHWGPVSLRGTEIGWSRGEQVPTEDYDNLYKEFNPVLFDADAIVKTAKDAGMK 106
           +   G   H+      G   G       P EDY+     FNP   + D  V+ AK AG K
Sbjct: 36  EAEMGAVFHYDLHVFDGIRYGQGNNRINPIEDYNI----FNPTELNTDQWVQAAKAAGCK 91

Query: 107 YLTITARHHDGFCLWPTAYTDFNITNTPY---KKDIVGALNEACKKQGIKFCIYYSVLDW 163
           +  +TA H  GF LW +    + +    +   K DIV     +C+K G++  IY  +  W
Sbjct: 92  FAVLTATHETGFGLWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGI-RW 150

Query: 164 HHPDYPIHSPK--NQTIDPKSDMSRYVVYMKNQLKELITKY-DPYMLWFDGQWEKPWTDE 220
           +     IH+ K   +    ++  + Y    +  + EL T+Y D YM+WFDG  + P  D 
Sbjct: 151 NSL-LGIHNFKAEGEGAFARNRQAWYKRLCEKMVTELCTRYGDLYMIWFDGGADDPRAD- 208

Query: 221 MGKDLYAYLKNLKPTIIINNRL--------GKEFAALE-----------------NKNID 255
            G D+   +   +P  +  + +        G E   +E                   +ID
Sbjct: 209 -GPDVEPIVNKYQPNCLFYHNIDRADFRWGGSETGTVEYPCWSTFPVPCSHHKRIESSID 267

Query: 256 VSKMIGDYDTPEQVVGKLNMQMPWESCFTICNQWAWKANDK--MKPLKQCLEIISKTAGG 313
             +++   D   +         P        ++W W+ +D+  + PL   ++   K+ G 
Sbjct: 268 QLELLKHGDKNGRYWVPAMADTPLRGA-NGRHEWFWEPDDENNIYPLNTLMDKYEKSVGR 326

Query: 314 NGNLLLNVGPMPDGRIEARQIERLKEIGD 342
           N  L+L + P P G I A   +RLKE+GD
Sbjct: 327 NATLILGLTPDPTGLIPAGDAQRLKEMGD 355