Pairwise Alignments

Query, 446 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 438 a.a., alpha-L-fucosidase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  250 bits (638), Expect = 7e-71
 Identities = 149/402 (37%), Positives = 212/402 (52%), Gaps = 12/402 (2%)

Query: 44  DFMDKRFGMFIHWGPVSLRGTEIGWSRGEQVPTEDYDNLYKEFNPVLFDADAIVKTAKDA 103
           +F D +FG+F+HWG  ++  T         +  ++Y  L   F P  FDAD  V   K +
Sbjct: 40  EFQDNKFGIFLHWGLYAMLATGEWTMTNNNLNYKEYAKLAGGFYPSKFDADKWVAAIKAS 99

Query: 104 GMKYLTITARHHDGFCLWPTAYTDFNITN-TPYKKDIVGALNEACKKQGIKFCIYYSVLD 162
           G KY+ +T+RHHDGF ++ T Y+DFNI   TP+K+DI+  L  AC KQGIK   YYS LD
Sbjct: 100 GAKYICLTSRHHDGFSMFDTQYSDFNIVKATPFKRDIIKELAAACSKQGIKLHFYYSHLD 159

Query: 163 WHHPDYPIHSPKNQT--IDPKSDMSRYVVYMKNQLKELITKYDPY-MLWFDGQWEKPWTD 219
           W   DYP       T   +P+ D   Y  +M NQL EL+T Y P   +WFDG W++    
Sbjct: 160 WTREDYPWGRTGRGTGRSNPQGDWKSYYQFMNNQLTELLTNYGPVGAIWFDGWWDQDGNP 219

Query: 220 EMGKDL---YAYLKNLKPTIIINNRLGKEFAALENKNIDVSKMIGDYDTPEQVVGKLNMQ 276
               +L   YA +  L+P  +I N   +   A E+  I    + G+      + G+    
Sbjct: 220 GFNWELPEQYAMIHKLQPGCLIGNNHHQTPFAGEDIQIFERDLPGE--NTAGLSGQSVSH 277

Query: 277 MPWESCFTICNQWAWKANDK-MKPLKQCLEIISKTAGGNGNLLLNVGPMPDGRIEARQIE 335
           +P E+C T+   W +K  D+  K  K  +  + K AG N NLL+N+GP PDG +    ++
Sbjct: 278 LPLETCETMNGMWGYKITDQNYKSTKTLIHYLVKAAGKNANLLMNIGPQPDGELPEVAVQ 337

Query: 336 RLKEIGDWLKTNGEAIYGTLGGPYQPNGEYATTRKGNKIYLHVLNSSLTKLSLKTIPGLK 395
           RLKE+G+W+   GE IYGT GG   P+    TT+KGNK+Y+H+LN     L L  +   K
Sbjct: 338 RLKEMGEWMNQYGETIYGTRGGAVAPHDWGVTTQKGNKLYVHILNLQDKALFL-PLADKK 396

Query: 396 VKKAYLLDKQPVNVVHKDDISVQLPANQASQS-DYIVVLELN 436
           VKKA L          K+   V L   +  +  DY+V L ++
Sbjct: 397 VKKAVLFKNGTPVRFTKNKEGVLLEFTEIPKDIDYVVELTID 438