Pairwise Alignments

Query, 446 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 605 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  117 bits (293), Expect = 1e-30
 Identities = 96/328 (29%), Positives = 147/328 (44%), Gaps = 68/328 (20%)

Query: 53  FIHWGPVSLRGTEIGWSRGEQVPTEDYDNLYKEFNPVLFDADAIVKTAKDAGMKYLTITA 112
           F+H+G  +  G E  W  G++ P          FNP   DA+  V+T KDAG K + +TA
Sbjct: 66  FLHFGINTFTGRE--WGDGQEDPAI--------FNPTELDAEQWVRTLKDAGFKMVLLTA 115

Query: 113 RHHDGFCLWPTAYTDFNITNTPYKK---DIVGALNEACKKQGIKFCIYYSVLDWHHPDYP 169
           +HHDGFCLWPTA T  ++ ++P+K    D+V  L  AC K  +KF +Y            
Sbjct: 116 KHHDGFCLWPTATTKHSVASSPWKNGQGDVVKELRNACDKYDMKFGVYL----------- 164

Query: 170 IHSPKNQTIDPKSDMSRYVVYMKNQLKELITKY-DPYMLWFDG-QWEKPWTDEMGKD--- 224
             SP ++  +   D  +Y  +   QL EL+T Y + + +WFDG   E P   +   D   
Sbjct: 165 --SPWDRNAECYGDSPKYNEFFIRQLTELLTNYGEVHEVWFDGANGEGPNGKKQIYDWDA 222

Query: 225 LYAYLKNLKPTIII------------NNRLGKE------------FAALENKNIDVSKMI 260
            Y  ++ L+P  ++               LG+E            +A  E  N    K +
Sbjct: 223 FYKTIQQLQPKAVMAIMGDDVRWVGNEKGLGRETEWSATVLTPGIYARSEENN----KRL 278

Query: 261 GDYDTPEQVVGKLNMQ-------MPWESCFTICNQWAWKAND--KMKPLKQCLEIISKTA 311
           G +   E +  +  ++        P E   +I   W + A +  K+K LK   +I  ++ 
Sbjct: 279 GVFSKAEDLGSRAMLEKATELFWYPSEVDVSIRPGWFYHAEEDSKVKSLKHLADIYFQSV 338

Query: 312 GGNGNLLLNVGPMPDGRIEARQIERLKE 339
           G N  LLLN+ P   G I    ++RL E
Sbjct: 339 GYNSVLLLNIPPDRRGLINEADVQRLNE 366