Pairwise Alignments

Query, 513 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 496 a.a., Outer membrane binding protein for dextran (SusD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 113/483 (23%), Positives = 193/483 (39%), Gaps = 53/483 (10%)

Query: 2   KNIKYIILFAALVFTTAGCKKFLNVTP---IEAQSGNNFWKTREEVEGFTNGIYARLRSK 58
           K + +I++ A L  T+  C  FL+  P   ++ +S      T E     T   Y  L+S 
Sbjct: 3   KKLTFIMILAVLALTS--CSDFLDKYPKYGVDPESE----VTNEIAVALTTACYKTLQSS 56

Query: 59  VAGTPQFFNGDDRAFFPALEIRGNSINVLSIDGDGANTFNALIGNNMKFIVSRGNRYDNL 118
                + ++ D  A        GNS        DG  T  A       FI    N +   
Sbjct: 57  NMYNQRLWSLDILA--------GNSEVGAGGGTDGLETVQAA-----NFIAQSDNGF--- 100

Query: 119 MKKIMSWKEWYDVIAASNIMYFEIDKVPSSSLQDADRRRYKAEAVFLRNLSYMFICKLFG 178
              +  W+  +  I   NI+   +  +PS+++ D  + R   EA FLR   Y  + +L+G
Sbjct: 101 --ALYVWRSPWVGIGRCNIV---LSNLPSAAISDEIKDRCMGEAYFLRAHYYYILVRLYG 155

Query: 179 DAVYYTEAY---HSTPLARTPQVEVMKKCIADMTAAKADLPTTYNDVSSNGFRPTKATAV 235
                 + +    ST +AR    EV  + ++D   A   LP   +   ++  R  K  A+
Sbjct: 156 GVPLRLQPFEPGQSTDIARNTVDEVYAQILSDCKNAVDMLPPKSSYGENDKGRACKEAAM 215

Query: 236 ALLMHLNMWAAAWDNENKTKYYEAVKTLATELDTYTNYKLLPITSENTLKIFKGRSSENL 295
           A+L  + +  A     N   YY  V TL  ++ T   Y L      +         +E+L
Sbjct: 216 AMLADIYLTLA----PNHRDYYNEVVTLCDQI-TAMGYDLSQCKYADNFDATINNGAESL 270

Query: 296 FGI----LQDFNYGEGFSLPAGFSYYFSHYPYRGTVTKTASSMAYNKDYISKLYPAGIPD 351
           F +      ++++  G +  +  S +    P    +   A       +   K Y AG   
Sbjct: 271 FEVQYSGSTEYDFWGGDNQSSWLSTFMG--PRNSGMVAGAYGWNLPTEEFIKEYEAGDLR 328

Query: 352 ARLTNWFENYDSGTGTFQFKKFAN-------IYTTGSGSAISVTSDDSAIIFRLPDCYLL 404
             +T  ++   +  G    + ++N          + + S    T+ ++ +++R  D  L 
Sbjct: 329 KDVTVLYQGCPAFDGMEYRRSWSNTGYNVRKFLVSKTVSPEYNTNPNNFVVYRYADVLLK 388

Query: 405 TAEALAELGDEGGARDFTNRVREAA--AAPPIVLSGQDLKDEIYRERCRELIGEGQFFFD 462
            AEAL ELG    A    N VR+ A  A  P  L+ + ++++I  ER  EL  EG  +FD
Sbjct: 389 KAEALNELGHPDQAAAPLNIVRQRAGLADVPTTLNQETMREKIIHERRMELAFEGHRWFD 448

Query: 463 LVR 465
           ++R
Sbjct: 449 MIR 451