Pairwise Alignments

Query, 821 a.a., cytochrome C biogenesis protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 664 a.a., cytochrome c-type biogenesis protein CcmF (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  166 bits (421), Expect = 3e-45
 Identities = 153/572 (26%), Positives = 246/572 (43%), Gaps = 61/572 (10%)

Query: 14  KIGQFFIVLAFSASLLSTIAYFYASREKNLEDKSWRNLGRIGFLVNF-CCVIGIGAILFY 72
           +IG F ++LA +A+L+ ++     + ++N+    W        L+      +   A++  
Sbjct: 4   EIGNFALMLALAAALVQSVLPMVGAAQRNV---LWMQSAVTTALIQCGLLAVAFAALMRS 60

Query: 73  LVLGHYNEYSYIYWHSSKQLPIHYIISAFWEGQEGSFLLWAFWQSFLGTLLIWKAKTWER 132
            ++  +   + +  +S    P+ Y ++A W   EGS LLW    +  G  +    K    
Sbjct: 61  FIVSDFTVVNVVA-NSHSLKPMIYKVAATWGSHEGSLLLWVLILAIFGAGVAVLGKNIPA 119

Query: 133 PVMTVVAFSQVFLTSMLLGVEIFGERIGSSPFILLRDSLDLKSMAPVVFANPENFANYLK 192
            +       Q +++   L   IF     S+PF       D    AP+             
Sbjct: 120 ELRARTLSVQAWISVGFLSFMIFT----SNPF-------DRMFPAPL------------- 155

Query: 193 FITDGRGLNPLLQNYWMVIHPPTLFLGFASMIVPFAYGIAALWQKRYKE-WIKPAMPWAL 251
              +G  LNPLLQ+  + +HPP L+LG+    + F++ +AAL + R    W +   PW L
Sbjct: 156 ---NGNDLNPLLQDIGLALHPPLLYLGYVGFSIVFSFAVAALIEGRVDPAWARWVRPWTL 212

Query: 252 FAVMVLGTGIIMGSFWAYEALNFGGFWAWDPVENASLIPWLTLIGAVHVMIAYKNTGHAY 311
            A + L  GI +GS+WAY  L +GG+W WDPVEN S +PWL     +H  I  +      
Sbjct: 213 AAWVSLTGGIALGSWWAYYELGWGGWWFWDPVENVSFMPWLLGTALLHSAIVTEKRDTFK 272

Query: 312 FTAIALVFLSFLLVLYASFLTRSGILGDTSVHSFTDMGMFGHLILYNVVFAVLAIVLIVI 371
              I L  L+F L L  +F+ RSG+L  TSVH+F      G  IL  ++F  +   L + 
Sbjct: 273 SWTILLAILTFSLSLLGTFIVRSGLL--TSVHAFAVDPERGVYIL-GLLFVSIGGSLALY 329

Query: 372 RWKELPITTKDEET-YSREFWMFIGALVVTIACIQVIFSTSVPVFNKAF-GTNFS--PPI 427
            W+   +      T  SRE  + I  L++  A   V+F T  P+F +A  G   S  PP 
Sbjct: 330 AWRAPQLEGGGLFTPISREAGLLINNLLLATATAAVLFGTLYPLFLEAVTGDKISVGPP- 388

Query: 428 DAVKYYNQWQAPFAVLITLISGFSQYLKYKRTDPRKFYSSLVSAIIFSVVLTAGLVYVAN 487
               ++N    P  + +  + G   +L +KR D     S L  AI   ++      ++  
Sbjct: 389 ----FFNASFIPIMLPLVFMMGIGPFLSWKRADLPGVMSRLKFAIGLGLIAALWAWWMDT 444

Query: 488 IYTNTMYILITFSCLFAVLSNAAVLYQAFGGKAKLA--------------GSAIAHIGFA 533
                  I +  +    V S    L +   G+  LA              G  IAH+G A
Sbjct: 445 DGPVLAIIAMGVAGWLLVASAREWLSRIKAGEVPLAESLRRAKNLPRAAHGMTIAHMGVA 504

Query: 534 FLILGALISAA--TNKPLSINSNNFIPVKDFE 563
            LILG + S+A  T + L  +    + +  +E
Sbjct: 505 VLILGMVGSSAWKTEQILFASPGTVVEIAGYE 536



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 779 AKDWVVFKAIEFPFINLYWAGTIIMVVGFLLSIFRRR 815
           + +W +    E PF+N  W GT+ +V+G   S+  RR
Sbjct: 609 SNEWTLRILFE-PFVNFIWIGTVFLVIGGTFSLTDRR 644