Pairwise Alignments

Query, 1477 a.a., DNA polymerase III subunit alpha from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1169 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

 Score =  645 bits (1664), Expect = 0.0
 Identities = 409/1167 (35%), Positives = 625/1167 (53%), Gaps = 108/1167 (9%)

Query: 261  FVHLHNHTQFSVLQSTISIPDLVKAAAAQKMPAVAMTDHANMMGAFHFVNNVLNHNKAAE 320
            FVHL  H+ +S+L+  + +  ++  A A   PA+ + D  N+                  
Sbjct: 23   FVHLRVHSAYSLLEGALPLKKIIGKAVADDQPAIGIADTNNLF----------------- 65

Query: 321  AKNAAAIEAGERPTEVVMTPIVGVEFFV-CNNHLDRTAKDNGYQ------MVLLAKNKKG 373
                AA+E  ++  +  + PI+G +  +   +  +   + + +Q      +VL+A  + G
Sbjct: 66   ----AALEFSQKAADDGLQPIIGCQLSIDMEDEAEGERRGHAHQFVKLPAIVLIAATEDG 121

Query: 374  YHNLAKMSSIAYTKGF-YYVPRIDREVIEQY-KDDIIVLSGNLSGEISNKILNMGESQAE 431
            Y  L ++ S AY +G  +   RI R  +       +I L+G  +G +   + +   + AE
Sbjct: 122  YARLVELVSRAYLEGEGHQQTRISRSWLAAGGTTGLIALTGAGAGPVDMALKSGSPALAE 181

Query: 432  EALIWWKNMFGDDFYVEVMRHNQEDEDRVNESLIALARKHAVKLVATNNTYYINKKDANA 491
              L     +FGD  YVE+ RH   D    N  +I LA +  + LVATN  ++ +  D +A
Sbjct: 182  ARLKALIELFGDRLYVELQRHGNYDRRHENR-MIDLAYRLDIPLVATNEAFFPSPSDYDA 240

Query: 492  HDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSGDEMKSLFADLPEAIVNIKEIVDK 551
            HD L+ V      +         R+ L   ++Y KS  EM +LFADLPEA+ N  E+  +
Sbjct: 241  HDALMAVAHNAMVSDDS------RFRL-TPDHYLKSRKEMAALFADLPEALENTIEVARR 293

Query: 552  IEIYKLAREVLLPKFDIPEEFLVAEDEADGGKRGENKFLRHLTYEGAKKRY-------GV 604
                   R  +LP+F        A D+ +  +R E   LR    EG ++R        G 
Sbjct: 294  CSFMLKTRGPILPRFT------GASDDPEEAERAEVAELRRQAEEGLEERLAKLGMAPGY 347

Query: 605  LTPEVTERLDFELQTIEKTGYPGYFLIVQDFIAEARRRDVSVGPGRGSAAGSVVAYCLWI 664
               +  ERL FEL  I++  +PGYFLIV DFI  A++ D+ VGPGRGS AGS+VAY L I
Sbjct: 348  KEEDYRERLAFELGVIQRMKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTI 407

Query: 665  TNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMEYVIGKYGSSQVAQIITYGTM 724
            T++DP+++ LLFERFLNP+RVSMPD DIDF  + R  V+ YV  KYG  QVAQIIT+G++
Sbjct: 408  TDVDPMRFSLLFERFLNPERVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSL 467

Query: 725  AAKSSIRDTARVLDLPLFEADKIAKLIPN-----MKLAKIFTLDEKTLKEALRPDEYERV 779
             A++++RD  RVL++P  + DKI KL+PN       L+K    + +  +EA    E E V
Sbjct: 468  QARAALRDVGRVLEMPYGQVDKICKLVPNNPANPTPLSKAIEEEPRLREEA----EKEPV 523

Query: 780  VELKNLGGLKDLSAETIQQAQILEGSLRNTGIHACGVIITPSDITNFVPVSTAKDSDLYV 839
            V            A  +  AQ +EG  R+   HA G++I    ++  VP+     SD+ V
Sbjct: 524  V------------ARLLDIAQKIEGLYRHASTHAAGIVIGDRPLSQLVPMYRDPRSDMPV 571

Query: 840  TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKKRFGIDLDPDNFPIDDVLTYELFQR 899
            TQF+   VE AGL+K DFLGLKTLT++K  +  V KR GI +D  + P+DD  TYE   R
Sbjct: 572  TQFNMKWVEQAGLVKFDFLGLKTLTVLKTAIDFVGKR-GIHIDLASIPLDDPKTYETLSR 630

Query: 900  GETIGIFQYESPGMQKYMKELKPTVFDDLIAMNALYRPGPMEYIPSFVRRKNGEEEIKYD 959
            GET+G+FQ ES GM+K +  ++P   +D+IA+ ALYRPGPME IP +  RK+GEEEI+  
Sbjct: 631  GETVGVFQVESAGMRKALIGMRPDCIEDIIALVALYRPGPMENIPVYNARKHGEEEIESI 690

Query: 960  LDACEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKPKFVK 1019
                +  LKET G+ VYQEQVM ++Q L+G++ GEAD+LR+AMGKK K  +DK + +FV 
Sbjct: 691  HPKIDYLLKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIKAEMDKQRARFVD 750

Query: 1020 QAAEKGHDATTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN 1079
             A + G      + I+     FA+Y FNKSH+  YA ++YQTAY+KAHYP E++AA ++ 
Sbjct: 751  GAVKNGVSKPQADLIFDLLAKFANYGFNKSHAAAYAIVSYQTAYMKAHYPVEFLAASMTL 810

Query: 1080 NMSDIKQVAFFMEECRQMSVTVLGPDVNESDLKFSVNAKGEVRFGMSAVKGVGEKAVESI 1139
            +MS+  ++  F ++  ++ + V+ P V  S   F       + + ++A+KGVGE AV+ I
Sbjct: 811  DMSNTDKINDFRQDAMRLGIQVVAPSVQTSHRHFE-TGDNRIYYSLAALKGVGESAVDHI 869

Query: 1140 IEERLANGPYGNVYDFAKRSNTRIVNKKAYESFVYSGAFDAFGGHRAQYFYIGPNDKMNG 1199
            +  R  + P+ ++ DF  R + +++N++ +ES + +GAFD FG  RA+         + G
Sbjct: 870  VAVR-GDRPFASLEDFCLRIDPKLLNRRVFESLIAAGAFDCFGYDRAEL--------IGG 920

Query: 1200 IEKIIKYANDFQNNESTSQASLFGGSKADLILEPSLPVSPEWALMDRLKYEKDAIGIFLS 1259
            +++I+ +A   Q N+ + Q+ +FG   A    + +LP    W   ++L  E   +G +LS
Sbjct: 921  LDRILGFAQRAQENKVSGQSDMFGAGAATGPEKIALPPYTPWLASEKLHREFQVLGFYLS 980

Query: 1260 GHPLDNYKLELDKFCTHGVKQLSIINKVRMGDNNEDILAEFEKLKNRELCVG---GLVVT 1316
             HPLD Y               +++ K+R+        A+F     +    G   G V +
Sbjct: 981  AHPLDTYN--------------NLLAKMRV-----QTFADFSAAVKKGAAAGRLAGTVTS 1021

Query: 1317 ASQRITKTGKPFGTFVFEDYDDASEMALFGEDFLKFKSFLTEGYFLQIRGRVGERFGKAG 1376
              +R T+TG   G   F D     E  LF E   +++  L  G  L +     ER    G
Sbjct: 1022 KQERKTRTGNKMGIVAFSDASGQFEAVLFSEMLNQYRDLLEPGKSLVMTVDAEERPEGIG 1081

Query: 1377 DWEFKITAINLMSELRDKLAKSLTIQV 1403
                +I  +  + E   ++ K+L + V
Sbjct: 1082 ---LRIRTLRSLEEESLQMQKALRVYV 1105