Pairwise Alignments

Query, 535 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 565 a.a., carboxyl-terminal protease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  126 bits (316), Expect = 2e-33
 Identities = 126/466 (27%), Positives = 202/466 (43%), Gaps = 76/466 (16%)

Query: 53  SIFLYGKELYYWNTSLPTYEVFNPRAFSSNEA----ELYAMTQYSLDPATGKPYEFVSTS 108
           S+  Y +E Y WN     Y++  P    + +      L +MT  +LD            S
Sbjct: 132 SVDQYLREKYLWNDD---YKLLTPNFRQAYDEFLRNTLLSMTTNTLDKKRN--------S 180

Query: 109 SGEPKYSFFDYTAATSG--KTGALKADVNGSANDYGF----SVQYQYNSTTDLRVKYVYP 162
           +G   YS F +        +T     +      +YGF    +V  + NS   L ++ V+ 
Sbjct: 181 NGT--YSLFSFIQKLDPDLQTSRSAKEKKTLEYNYGFVNFIAVGNRNNSNYGLVIQGVHK 238

Query: 163 NSPAAVQGLTRGCRITSVNGRTDLTYPGAVNFLNNAIFGTNATVTLAFNDIDGNPKTAVI 222
            S A  +GL RG  IT ++ +   T    V    + +   ++  ++   D DG  K   I
Sbjct: 239 GSSADKEGLKRGMEITEIDNQRITTTN--VQACYSKLIKPSSPTSIKVKDKDG--KVYTI 294

Query: 223 SSSLYTVNPILFTHVYTVGTKKVGYIVFNSFTNNASTAINTTFSNFATQGVSELIIDLRY 282
           +S     NPI+   V     +K+GY+V+++F +     +   F  F +Q ++ELI+DLRY
Sbjct: 295 NSGPIYANPIIHHQV----NEKIGYLVYSAFESGFDQELFDVFKEFKSQNITELILDLRY 350

Query: 283 NGGGYVSTATQMINLAAPAGETGNTMFTSYYNAYLQSITSAQRKASVLAHQPLLDDAGKL 342
           NGGG V++A  + +  A       T  +  YN     +   QR     A           
Sbjct: 351 NGGGDVTSANLISSCIAGDLCIDKTFASYRYNDERMKVLGNQRPIQKFA----------- 399

Query: 343 QTFTTGVNGKYATYADLNYSPTAADNIEKFAKSGSLNLNRVYFIVTGSTASASELTINSL 402
                     Y+ Y          DN+     +G LNL ++Y +VT  +ASASEL IN+L
Sbjct: 400 ----------YSQY----------DNLSTSLSAGGLNLRKIYCLVTDDSASASELVINAL 439

Query: 403 KPV-MDVKLIGRTTYGKPVGFFPIRI----DKVDMYIPEFETKNKLGVGGYYSGLTVDKE 457
           + + ++V LIG TT+GK VG   + +    DK  ++   F+  N  G G + +G T D E
Sbjct: 440 RGIDIEVILIGTTTHGKNVGMEGVELTAGTDKYLLFPITFQAYNAKGFGDFENGFTPDYE 499

Query: 458 SAEDLSKA--------WGDETETLLAYALLYAKNGNFVTTAAKTAS 495
             E+            +G E++ L A A+    +GN VTT  +  +
Sbjct: 500 INENKPNGEYFEGYGDFGAESDPLYAKAISLI-SGNEVTTPTRAVN 544