Pairwise Alignments

Query, 811 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 808 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  458 bits (1179), Expect = e-133
 Identities = 273/784 (34%), Positives = 405/784 (51%), Gaps = 55/784 (7%)

Query: 14  SLTFAQDNLKLWYKQPAKEFTEALPLGNGRLGAMVYGGVKHELIQLNEATLWSGGPMRTN 73
           SL   ++ +KLWY +PA E+ ++LPLGNGRLG M+YGG++ E + LNE+T+WSG      
Sbjct: 21  SLKATENKMKLWYDKPADEWMKSLPLGNGRLGVMIYGGIETETLALNESTMWSGEYDEHQ 80

Query: 74  MNPGAYANLLLAREALLKNEDYAAGDQLARNMQGNYSDS---YFPLGNLSITQDLPDNDP 130
             P     L   R+   +N + + G+ +A NM      S   + P+G+L I    P  + 
Sbjct: 81  QRPFGREKLNQVRKLFFEN-NLSEGNHVAGNMMAGSPHSVGTHLPIGDLKINFSYPQGEI 139

Query: 131 SAYYRDLDIKNAITTTRFTIGGITYTRQMISSAPDQVMVIRFTASRPGALGFKLATSNVL 190
           S Y  +LD+  AI T  + +G   Y RQ I+S PD V+ +   ASRP A+  +L    +L
Sbjct: 140 SDYRHELDLHTAINTVSYKVGNTEYIRQCIASNPDDVVAMHIKASRPKAITMELELK-LL 198

Query: 191 KHQNVAISNNGLAMRGKVPAHIQPNYINTKNPIEWDDSLHQRGMRYELLVKAINKGGSVS 250
           +  NV  S N L   G                    +   + G+ +E  +    KGG++ 
Sbjct: 199 RQANVVASGNQLIYTGNAEF----------------EKHGKGGVHFEGRIAVQIKGGTIK 242

Query: 251 TDTSGITVKNADEVLVYLSAATSFNGFDKSPVTQGKDENKLATKYLAKALMKAWPALLSA 310
            +   + ++ A EV +     T+F    K+    G +      K +  A  K +  L   
Sbjct: 243 AEGKKLYIEKATEVTLLSDVRTNF----KNNTFSGYNYKIKCEKTIELASKKDFKTLKKK 298

Query: 311 HTADYHHYFNRVNFNLAVPADNSNATLPTNERLIKYTNGVQDPLFETLYFQYNRYLLISC 370
           H  DY   F+RV  +    A   +  LP +ER  +   G  DP  + L+FQY RYLLI+ 
Sbjct: 299 HIEDYSPLFSRVGLSFEHHAKFDH--LPNDERWARVKKGESDPGLDALFFQYARYLLIAS 356

Query: 371 SRPGG-MPANLQGIWNKDL--RPAWSANYTTNINVQMNYWPAEAANLSEMQLPFIDYIKN 427
           SRP   +P  LQG +N +L     W+ +Y  +IN + NYW A   NL+E  LP  DYIK+
Sbjct: 357 SRPNSPLPVALQGFFNDNLACHMGWTNDYHLDINTEQNYWIANVGNLAECHLPLFDYIKD 416

Query: 428 AAVTGKITATQYYHARGWAVHHNSDIWAISNPVGEGTGDPRWANWAMGSPWLSQHLWWHY 487
            ++ G  TA   Y  +GW  H  ++ W  +      +G   W  +   S WL+ HLW  Y
Sbjct: 417 LSIHGAKTAKDLYGCKGWTAHTTANPWGYTAV----SGSILWGLFPTASSWLASHLWTQY 472

Query: 488 QFTQDKNYLRQTAYPLMKSAAQFCMDWLV--PHQGYLVTAPSVSPENAYRDQNGKEQHVS 545
            +TQDK++L+ TAYPL+KS A+F +D++V  P   YLVT PS+SPEN++R Q G+E   S
Sbjct: 473 DYTQDKDFLKNTAYPLLKSNAEFLLDYMVIDPRNNYLVTGPSISPENSFRHQ-GQEFCAS 531

Query: 546 IATTMDMSIIRDLFTNVISASNILGYDKAFRDSIIAKQALLYPLHIGKKGNLQEWYKDYE 605
           +  T D  +  ++F+  + ++ IL  D +F DS+    + L P  I   G +QEW++DYE
Sbjct: 532 MMPTCDRVLAYEIFSACLQSTEILNVDASFADSLRTAISKLPPFRISTNGGVQEWFEDYE 591

Query: 606 DIERQHRHVSHLFGLFPGAEISPVKTPEFTAAAKKALELRGDG----GTGWSLAWKINFW 661
           +    HRH +HL  L+P ++I+  KTPE   AA+K +E R        T WS A  I F+
Sbjct: 592 EAHPNHRHTTHLLSLYPYSQITLNKTPELAKAARKTIERRLAAKDWEDTEWSRANMICFY 651

Query: 662 ARLLDGNHAYKMIRAVIHHISGEGGSYPNLFDSCPP---------FQIDGNFGSLSGMCE 712
           ARL D  +AY  ++ ++  +S E     N+F   P          F  DGN    +G+ E
Sbjct: 652 ARLKDSENAYNSVKQLLGKLSRE-----NMFTVSPAGIAGAGEDIFAFDGNTAGAAGIAE 706

Query: 713 MLLQSQSDEINMLPALPDAWAEGNISGLKARGNFTVDMDWKNKRLVSASVLSGAGGACRI 772
           MLLQS  + I +LP LP  W  GN  GL ARG   +D  WKN ++V+A + + A     +
Sbjct: 707 MLLQSHDNCIELLPCLPKEWKNGNFKGLCARGGIEIDASWKNSQIVNAVLKATAPIEFTL 766

Query: 773 RTAN 776
           R +N
Sbjct: 767 RLSN 770