Pairwise Alignments

Query, 284 a.a., ABC transporter permease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 280 a.a., Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD from Mycobacterium tuberculosis H37Rv

 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 22/230 (9%)

Query: 22  HEVWAYRDLLVLLVRRDFVSFYKQTILGPLWFFIQPLFTTIIFTFIFGNLAGIS-TDSLP 80
           HE+W +      L  +D    Y++++LGP W  I    T +    ++  L  +  ++ LP
Sbjct: 31  HELWLH------LGWQDIKQRYRRSVLGPFWITIATGTTAVAMGGLYSKLFRLELSEHLP 84

Query: 81  KPLFYMAGITAWNYFADCLTKTSSVFRDNAGIFGKVYFPRLIMPLSIVVSNLVRFGVQML 140
              +   G+  WN     +   + VF  N G+       +L  PLS+ V  LV    QM+
Sbjct: 85  ---YVTLGLIVWNLINAAILDGAEVFVANEGLI-----KQLPAPLSVHVYRLV--WRQMI 134

Query: 141 LFLILMAYYYFSGANFNI--SWAICLFPVIVILMALLGLGAGMIISAMTTKYRDLAFLIG 198
            F   +  Y+     F    SWA   F   + L+ L  +   +    + T+YRD+  L+ 
Sbjct: 135 FFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFGILATRYRDIGPLLF 194

Query: 199 FGVQLLMYATTVIYPLSEAINKYPAYAW--IIEYNPMTPIIETFRYGFLG 246
             VQLL + T +I+   E + +  A  W  I+E NP+   ++  R   LG
Sbjct: 195 SVVQLLFFMTPIIWN-DETLRRQGAGRWSSIVELNPLLHYLDIVRAPLLG 243