Pairwise Alignments

Query, 815 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 811 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  293 bits (751), Expect = 2e-83
 Identities = 236/798 (29%), Positives = 386/798 (48%), Gaps = 56/798 (7%)

Query: 24  TSQSRIYGRVLDAEGKNIEFATIALLK--DSVLVKTTFTEKDGLFSFDQLAYGKYLIKIS 81
           ++QS I G++ + +   I  ATI L    DS  +  T ++ DG F    +  G Y + +S
Sbjct: 21  SAQSVISGKITNNDSSPIVGATILLSNGMDSTYITGTTSDLDGRFKMINVKSGNYFLSLS 80

Query: 82  VVGSPVYQTDTLVLSANHAV-IGLSDIKIKAVATNLKEVNISGQKAFVERKIDRTVVNVD 140
           ++G   Y+   + L    ++ + L DI ++  +  L  VNI G++  ++ +  +  VN+ 
Sbjct: 81  MIG---YKKANIPLQIKESMNLELGDITLEEDSYILSTVNIIGKRPPIKAEPGKMTVNLS 137

Query: 141 ALISNAGTTALDVLSKSPGVNVDQNGAISLKGKNGVAIFIDDKPTYLSGSDLENYLRSLP 200
           + + +     LD L K PGV V  +G I L GK+G  + +DDK TYLSG +L NYLRS+P
Sbjct: 138 SALLSTDGNILDALRKLPGVIVQNDGTIILNGKSGANVLMDDKVTYLSGENLINYLRSIP 197

Query: 201 SSSLDQIELMTNPPAKYDAAGNGGVINIKTKKTKTAGFNGGINLSLNQGELSRSNNSFNF 260
           +SS++ IEL++ P +K+DA+G+ G+INI+ KK K  G +   +  L QG+ ++ N +   
Sbjct: 198 ASSIENIELISQPSSKHDASGSSGIINIQKKKIKEQGISLTASSGLEQGKHTKGNENLTL 257

Query: 261 NYRKDKINVFGNLSYNLNNSFTDLDLNRKYKNADGSAKSYFNQ--NSYFRRHGNTFNLKT 318
           N+  +K+N++ + SY     F +L ++  Y +          +  +S   R      +KT
Sbjct: 258 NFHHNKLNMYADYSYYWGKDFIELSVSGHYLDPMTLKPLELRKDFDSDINRQYKGHYIKT 317

Query: 319 GLDYYASDRTTWGVVLTG--MNRISKQVNNNTSNLSNASMQLDSIIRAENIDQIKYQN-- 374
           G+DY  S++   G   +   +NR +KQ    +   +N   Q DS + A +     Y N  
Sbjct: 318 GVDYDLSEKIAIGTYFSSSWLNR-NKQEVTVSDFFNNDKTQSDSTLTALSTPDYSYTNII 376

Query: 375 GGVNLNYRHKFKQAGRELTFDA--DYLLYRNQTDQTYYNFSYLPGGALKYQDILTGNLPS 432
           GG N+ Y  KF + G+   +DA  DY L+ NQ D       +  G      D L+G    
Sbjct: 377 GGANMIY--KFAKTGK---WDASFDYQLF-NQEDNHLLKSFFQTGIHPVKGDTLSGITNG 430

Query: 433 NIDIYTAKVDYSHPLENKWKLDAGAKTAYTKTDNIADYFNTANGKTSADYEKSNHFLYEE 492
           +I IY+ + + S+ + +K+ +  G K+ +    + A Y N   G    D + S+ F Y E
Sbjct: 431 DIKIYSGQTNLSYDISDKFGITTGLKSVFVHISSDALYKNLIAGDWREDSDLSSSFAYHE 490

Query: 493 NINAVYLNISRE-GKRFSLQAGLRYENTVSNGHQLGNLIKPDSSFKRTYNSLFPTFYFSY 551
           NI A YL ++ +   RFS + GLR E+T +  +   N    DS F ++Y  LFPT    Y
Sbjct: 491 NIYAGYLQLNAKWSARFSTEIGLRLESTYTKSNY--NSAVQDSVFNQSYVHLFPTLMVQY 548

Query: 552 KLDTAGNNQLGLNYGRRIDRPYYQDLNPFFSPLDKFTYYVGNPFLKPSFTQSVELSHTYK 611
           +L  + N+ L + Y RRI RP Y+++NPF    D+F Y  GN  L+P    ++E+S   K
Sbjct: 549 QL--SENHNLSMAYSRRIVRPNYRNMNPFVEVRDQFLYEQGNTELRPELIDNIEISWLLK 606

Query: 612 NKITTTFGYSWVRDEVNETIEIL-NGTYYSRPANVGKTRVANVSVNAEIDLAK----WLK 666
            + +    YS   D ++ +  +  N      P N+      +  V A ++  K    W  
Sbjct: 607 KRYSFNVFYSHRSDPISLSFLVEDNNRVLLMPQNLSGNN--SFGVRAGLNNLKPFQWWTS 664

Query: 667 -LNAYMEFAKIVSKTDFYTGFLVTNGSYFRTNPNL----QFKISQTWNAEMSMSYQSKLS 721
            +N  + + K    T    G  + N     T P L    QF +   W+AE    Y  ++ 
Sbjct: 665 HINGSLTYKKFSWAT---LGKTLKNEV---TTPMLHISNQFTLPYGWDAEALGFYSGEMI 718

Query: 722 NVQFLLGSVHEFGAAVQKKL-SAKSTLKLTANDIFRDRIFNGVINNLAATEANW-----K 775
             Q  +  +      V+K L + K +L + A+DIF             + E N+     +
Sbjct: 719 EGQTRVKPLWTISLGVRKNLCNNKFSLYIYAHDIFHSN------RPHVSMETNYLYYASQ 772

Query: 776 NKQDSRNFVLSYSYRFGK 793
            K DSR   +S SYRF +
Sbjct: 773 EKNDSRMIGISLSYRFNR 790