Pairwise Alignments

Query, 815 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 725 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  150 bits (379), Expect = 2e-40
 Identities = 169/703 (24%), Positives = 289/703 (41%), Gaps = 47/703 (6%)

Query: 128 VERKIDRTVVNVDALISNAGTTALDVLSKSPGVNVDQNGAISLKGKNGVAIFIDDKPTYL 187
           V+RK DR +++V    +  G   +++L ++PGV +     IS+ G +G  +F+D++   L
Sbjct: 52  VKRKADRFILSVPPAQNKDG---VELLQQAPGVWLSDE-RISINGSSGTKVFVDNREIKL 107

Query: 188 SGSDLENYLRSLPSSSLDQIELMTNPPAKYDAAGNGGVINIKTKKTKTAGFNGGINLSLN 247
           +G  L  YLRSL S  + ++E++    A  DA   GG I+I  ++    GF G  NLS+N
Sbjct: 108 TGEMLIGYLRSLKSDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQG--NLSMN 165

Query: 248 ---QGELSRSNNSFNFNYRKDKINVFGNLSYNL-NNSFTDLDLNRKYKNADGSAKSYFNQ 303
                 L     S + NY   K + +G  S  L   +  DL + R Y   D      F+ 
Sbjct: 166 ASFASSLQSYQPSGSLNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKG----FSS 221

Query: 304 NSYFRRHGNTFNLKTGLDYYASDRTTWGVVLTGMNRISKQVNNNTSNLSNASMQLDSIIR 363
            +  ++      ++ G  Y      + GV L  + R     + + S LS   + ++S  +
Sbjct: 222 LARMKQPSRYGTIRMGTVYTMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMES--Q 279

Query: 364 AENIDQIKYQNGGVNLNYRHKFKQAGRELTFDADYLLYRNQTDQTYYNFSYLPGGALKYQ 423
                +  Y       NY HK  + G  L    DY+         Y  F  +  GAL   
Sbjct: 280 GVYRQKETYNMYTATANYIHKLDKDGSVLKLVTDYISKDLHGRNQYQIFQEI--GALNKD 337

Query: 424 DILTGNLPSNIDIYTAKVDYSHPLENKWKLDAGAKTAYTKTDNIADYFNTANGKTSADYE 483
            +      +   I TA + +   L  K     G K  YT   + A Y      ++     
Sbjct: 338 TVYRSRSNATYQIATADLSWKQQLHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNV 397

Query: 484 KSNHFL-YEENINAVYLNISREGKRFSLQAGLRYENTVSNGHQLGNLIKPDSSFKRTYNS 542
              + L Y ENI A+Y   S + KR S+  GLR E T ++               R Y  
Sbjct: 398 AYGYELDYHENIGALYGTYSLDMKRGSVHIGLRGEYTQTSNE--------TERRTRKYWD 449

Query: 543 LFPTFYFSYKLDTAGNNQLGLNYGRRIDRPYYQDLNPFFSPLDKFTYYVGNPFLKPSFTQ 602
            FP    ++  D      L   YGR I+RP +  LNP      +++Y +GNP L+P++  
Sbjct: 450 WFPHIDGNFYFDEIHKWMLIGQYGRYIERPTFSALNPNRIQTSEYSYLIGNPMLRPTYIN 509

Query: 603 SVELSHTYKNKITTTFG----YSWVRDEVNETIEILNGTYYSRPANVGKTRVANVSVNAE 658
              ++  Y  + T T G    +  +R    E  E  + +Y     N  +     V++ A 
Sbjct: 510 KFSITLVYNFRYTLTVGGNLHHDLIRQFGKEDAENSDISYVIN-ENHNRENHWFVAITAP 568

Query: 659 IDLAKWLKLNA----YMEFAKIVSKTDFYTGFLVTNGSYFRTNPNLQFKISQTWNAEMSM 714
                WL LNA      +  ++  + D++  FL     YF  N N    +   ++ E   
Sbjct: 569 WQPLNWLNLNASFIGVRQDIRMYREDDYFGHFL-----YF-ANANATVLLPSDYSLEAQY 622

Query: 715 SYQSKLSNVQFLLGSVHEFGAAVQKK-LSAKSTLKLTANDIFRDRIFNGVINNLA--ATE 771
           +  S+L +    +   H F   ++KK    +    L  ++IF    +N   +N+   +++
Sbjct: 623 NGVSRLYSGNSGIDPRHTFNLHLRKKWKDGRCVATLGVDNIFNR--YNSYFSNVPSYSSQ 680

Query: 772 ANWKNKQDSRNFVLSYSYRFGKAFSSPAKHESSGADAEKNRVK 814
             ++     R   L++++ F     S A      + +E++R++
Sbjct: 681 NRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERSRIE 723