Pairwise Alignments

Query, 815 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 715 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 67.8 bits (164), Expect = 2e-15
 Identities = 143/676 (21%), Positives = 248/676 (36%), Gaps = 127/676 (18%)

Query: 1   MKYKLVAFLAVWINIAFTFAQAQTSQSRIYGRVLDAEGKNIEFATIALLKDSVLVKTTFT 60
           MK   +A + ++  I      AQ S   I GRV D  G+ +  ATI++  +        T
Sbjct: 1   MKPTFIASILIFSFIVTCSTFAQQSTEHISGRVTDTNGEPLPGATISIKGEET---GAVT 57

Query: 61  EKDGLFSFDQLAYGKYLIKISVVGSPVYQTDTLVLSANHAVIGLSDIKIKAVATNLKEVN 120
             DG ++      G Y+I  S +G    Q              LS+ +      +L  V 
Sbjct: 58  SVDGTYTLQLPGIGSYIITASYIGYQTEQKRITTEKGKKVNFSLSEDQF-----DLGTVV 112

Query: 121 ISGQKAFVERK----IDRTVVNVDALISNAGTTALDVLSKSPGV----NVDQNGAISLKG 172
           ++G +     K    I R + + D    NA   A  + ++ PG+    ++DQ  AI+++G
Sbjct: 113 VTGTRTPKLLKDAPIITRVITSDDIKKVNANNVADLLKTELPGIEFSFSMDQQTAINMQG 172

Query: 173 KNGVAIFIDDKPTYLSGSDLENY-LRSLPSSSLDQIELMTNPPAK-YDAAGNGGVINIKT 230
             G ++        L+G  L N     L   ++++IE++    +  Y ++  GGVINI T
Sbjct: 173 FGGNSVLFLVDGERLAGETLNNVDYERLNLDNVERIEIVKGAASTLYGSSAIGGVINIIT 232

Query: 231 KKTKTAGFNGGINLSLNQGELSRSNNSFNFNYRKDKINVFGNLSYNLNNSFTDLDLNRKY 290
           +++    +N  +N   ++    R   +  FN    K N   N+ YN  +++  +D    +
Sbjct: 233 RESDDP-WNLNLNSRFSEHNDQRCGGTAGFN--AGKFNSLTNVQYNNVDTYA-VDNPGDF 288

Query: 291 KNADGSAKSYFNQNSYFRRHGNTFNLKTGLDYYASDRTTWGVVLTGMNRISKQVNNNTSN 350
               GS    F +   +R    T  L   + YY  +R   G                   
Sbjct: 289 STVFGSRVWNFKERLIYRPL-ETLKLTGRVGYYFRERNKPG------------------- 328

Query: 351 LSNASMQLDSIIRAENIDQIKYQNGGVNLNYRHKFKQAGRELTFDADYLLYRNQTDQTYY 410
                         +  D+ +  +GG+  NY      +  E+ +  D      Q D++ Y
Sbjct: 329 --------------DTQDRYRGFSGGMKANYTFNI-MSNLEVGYTFD------QYDKSDY 367

Query: 411 NFSYLPGGALKYQDILTGNLPSNIDIYTAKVDYSHPLENKWKLDAGAK------TAYTKT 464
              Y      K       N+  N+        Y++    K  L  GA        +Y  T
Sbjct: 368 QSLY------KNDVRDYSNVQHNVHAL-----YNYTFNGKHTLTVGADYLRDYLMSYQFT 416

Query: 465 DNIADYFNTANGKTSADYEKSNHFLYEENINAVYLNISREGKRFSLQAGLRYENTVSNGH 524
           DN     +TA+     D+  +                    +R ++ AGLR++       
Sbjct: 417 DNADHTMHTADAFGQFDWNPT--------------------ERLNVIAGLRFD------- 449

Query: 525 QLGNLIKPDSSFKRTYNSLFPTFYFSYKLDTAGNNQLGLNYGRRIDRPYYQDLNPFFSPL 584
                   DS+ +     L P     YK+   GN  L  +Y +    P  +++   F+  
Sbjct: 450 -----YFSDSNVRH----LSPHLGMMYKI---GNCSLRGSYSQGFRSPTLKEMYMVFNMA 497

Query: 585 DKFTYYVGNPFLKPSFTQSVELSHTY---KNKITTTFGYSWVRDEVNETI-EILNGTYYS 640
           +    Y GNP LK   + +  +S  Y   +   + T  Y+ V + +N    E   G  Y+
Sbjct: 498 NMMMIY-GNPDLKSETSHNFSVSAEYTKSRYNFSITGYYNLVHNRINTVYSEDPKGQIYT 556

Query: 641 RPANVGKTRVANVSVN 656
              N  K  +A +  N
Sbjct: 557 ---NTDKMDIAGIDAN 569